Protein–RNA interactions for Protein: P35583

Foxa2, Hepatocyte nuclear factor 3-beta, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa2P35583 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
Foxa2P35583 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Foxa2P35583 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Foxa2P35583 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa2P35583 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Foxa2P35583 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa2P35583 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Foxa2P35583 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa2P35583 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa2P35583 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Foxa2P35583 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa2P35583 Serp2-204ENSMUST00000228055 705 ntBASIC16.26■□□□□ 0.19
Foxa2P35583 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa2P35583 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa2P35583 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa2P35583 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa2P35583 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Foxa2P35583 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa2P35583 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Foxa2P35583 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Foxa2P35583 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Foxa2P35583 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.25■□□□□ 0.19
Foxa2P35583 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Foxa2P35583 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Foxa2P35583 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Foxa2P35583 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Foxa2P35583 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Foxa2P35583 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Foxa2P35583 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa2P35583 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Foxa2P35583 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa2P35583 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa2P35583 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa2P35583 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa2P35583 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa2P35583 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa2P35583 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Foxa2P35583 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa2P35583 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa2P35583 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa2P35583 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.24■□□□□ 0.19
Foxa2P35583 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa2P35583 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Foxa2P35583 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa2P35583 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Foxa2P35583 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Foxa2P35583 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.23■□□□□ 0.19
Foxa2P35583 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.23■□□□□ 0.19
Foxa2P35583 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxa2P35583 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxa2P35583 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Foxa2P35583 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Foxa2P35583 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.23■□□□□ 0.19
Foxa2P35583 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Foxa2P35583 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxa2P35583 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.23■□□□□ 0.19
Foxa2P35583 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Foxa2P35583 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxa2P35583 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxa2P35583 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxa2P35583 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Foxa2P35583 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.22■□□□□ 0.19
Foxa2P35583 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa2P35583 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.22■□□□□ 0.19
Foxa2P35583 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa2P35583 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa2P35583 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa2P35583 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa2P35583 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa2P35583 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa2P35583 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa2P35583 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa2P35583 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Foxa2P35583 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa2P35583 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa2P35583 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa2P35583 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa2P35583 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa2P35583 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Foxa2P35583 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Foxa2P35583 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.22■□□□□ 0.19
Foxa2P35583 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxa2P35583 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxa2P35583 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxa2P35583 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxa2P35583 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.21■□□□□ 0.19
Foxa2P35583 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxa2P35583 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.21■□□□□ 0.19
Foxa2P35583 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxa2P35583 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxa2P35583 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxa2P35583 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Foxa2P35583 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Foxa2P35583 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxa2P35583 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxa2P35583 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxa2P35583 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxa2P35583 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxa2P35583 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Foxa2P35583 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms