Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Thbs1P35441 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Thbs1P35441 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Thbs1P35441 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thbs1P35441 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thbs1P35441 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.87■□□□□ 0.45
Thbs1P35441 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thbs1P35441 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Thbs1P35441 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Thbs1P35441 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thbs1P35441 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thbs1P35441 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Thbs1P35441 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.87■□□□□ 0.45
Thbs1P35441 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.87■□□□□ 0.45
Thbs1P35441 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.87■□□□□ 0.45
Thbs1P35441 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Thbs1P35441 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Thbs1P35441 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thbs1P35441 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Thbs1P35441 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.87■□□□□ 0.45
Thbs1P35441 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thbs1P35441 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thbs1P35441 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Thbs1P35441 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Thbs1P35441 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Thbs1P35441 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thbs1P35441 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thbs1P35441 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Thbs1P35441 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thbs1P35441 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thbs1P35441 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Thbs1P35441 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thbs1P35441 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Thbs1P35441 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Thbs1P35441 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Thbs1P35441 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Thbs1P35441 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Thbs1P35441 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Thbs1P35441 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.85■□□□□ 0.45
Thbs1P35441 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Thbs1P35441 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Thbs1P35441 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Thbs1P35441 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Thbs1P35441 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Thbs1P35441 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Thbs1P35441 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Thbs1P35441 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Thbs1P35441 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.84■□□□□ 0.45
Thbs1P35441 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Thbs1P35441 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Thbs1P35441 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Thbs1P35441 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Thbs1P35441 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Thbs1P35441 Gm27454-201ENSMUST00000185090 204 ntBASIC17.84■□□□□ 0.45
Thbs1P35441 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.84■□□□□ 0.45
Thbs1P35441 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Thbs1P35441 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Thbs1P35441 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Thbs1P35441 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Thbs1P35441 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Thbs1P35441 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Thbs1P35441 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Thbs1P35441 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Thbs1P35441 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Thbs1P35441 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Thbs1P35441 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Thbs1P35441 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Thbs1P35441 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.83■□□□□ 0.44
Thbs1P35441 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Thbs1P35441 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Thbs1P35441 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Thbs1P35441 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.83■□□□□ 0.44
Thbs1P35441 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Thbs1P35441 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Thbs1P35441 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
Thbs1P35441 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thbs1P35441 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thbs1P35441 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thbs1P35441 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thbs1P35441 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Thbs1P35441 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thbs1P35441 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thbs1P35441 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Thbs1P35441 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Thbs1P35441 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Thbs1P35441 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thbs1P35441 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thbs1P35441 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thbs1P35441 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thbs1P35441 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thbs1P35441 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Thbs1P35441 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thbs1P35441 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thbs1P35441 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thbs1P35441 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thbs1P35441 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thbs1P35441 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Thbs1P35441 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Thbs1P35441 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Thbs1P35441 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms