Protein–RNA interactions for Protein: P29037

Tbp, TATA-box-binding protein, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TbpP29037 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TbpP29037 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TbpP29037 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TbpP29037 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TbpP29037 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TbpP29037 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TbpP29037 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TbpP29037 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TbpP29037 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TbpP29037 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TbpP29037 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TbpP29037 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TbpP29037 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TbpP29037 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TbpP29037 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.34□□□□□ -0.11
TbpP29037 Gm11599-201ENSMUST00000118720 878 ntBASIC14.34□□□□□ -0.11
TbpP29037 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TbpP29037 Gm7432-201ENSMUST00000210343 879 ntBASIC14.34□□□□□ -0.11
TbpP29037 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TbpP29037 BC021767-201ENSMUST00000126387 1716 ntBASIC14.34□□□□□ -0.11
TbpP29037 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.34□□□□□ -0.11
TbpP29037 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TbpP29037 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TbpP29037 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TbpP29037 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TbpP29037 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TbpP29037 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TbpP29037 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TbpP29037 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TbpP29037 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TbpP29037 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TbpP29037 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TbpP29037 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TbpP29037 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.33□□□□□ -0.12
TbpP29037 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.33□□□□□ -0.12
TbpP29037 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TbpP29037 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TbpP29037 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
TbpP29037 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TbpP29037 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TbpP29037 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.33□□□□□ -0.12
TbpP29037 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TbpP29037 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TbpP29037 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TbpP29037 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TbpP29037 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TbpP29037 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
TbpP29037 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TbpP29037 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TbpP29037 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TbpP29037 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TbpP29037 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TbpP29037 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TbpP29037 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TbpP29037 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TbpP29037 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TbpP29037 Gm8503-201ENSMUST00000118131 455 ntBASIC14.32□□□□□ -0.12
TbpP29037 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TbpP29037 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TbpP29037 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TbpP29037 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TbpP29037 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TbpP29037 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TbpP29037 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TbpP29037 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TbpP29037 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TbpP29037 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TbpP29037 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TbpP29037 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TbpP29037 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TbpP29037 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC14.31□□□□□ -0.12
TbpP29037 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TbpP29037 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TbpP29037 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TbpP29037 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TbpP29037 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
TbpP29037 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TbpP29037 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TbpP29037 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TbpP29037 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
TbpP29037 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TbpP29037 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TbpP29037 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TbpP29037 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TbpP29037 Gm11847-201ENSMUST00000125165 1119 ntBASIC14.3□□□□□ -0.12
TbpP29037 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC14.3□□□□□ -0.12
TbpP29037 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TbpP29037 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TbpP29037 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
TbpP29037 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TbpP29037 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.3□□□□□ -0.12
TbpP29037 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
TbpP29037 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
TbpP29037 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TbpP29037 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TbpP29037 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TbpP29037 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TbpP29037 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TbpP29037 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TbpP29037 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms