Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf9P20334 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf9P20334 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Tnfrsf9P20334 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf9P20334 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.62■□□□□ 0.09
Tnfrsf9P20334 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Tnfrsf9P20334 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf9P20334 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Tnfrsf9P20334 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Tnfrsf9P20334 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnfrsf9P20334 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnfrsf9P20334 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnfrsf9P20334 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnfrsf9P20334 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnfrsf9P20334 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnfrsf9P20334 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Tnfrsf9P20334 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.61■□□□□ 0.09
Tnfrsf9P20334 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Tnfrsf9P20334 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.61■□□□□ 0.09
Tnfrsf9P20334 Gm9988-201ENSMUST00000069786 435 ntBASIC15.61■□□□□ 0.09
Tnfrsf9P20334 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Tnfrsf9P20334 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Tnfrsf9P20334 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.61■□□□□ 0.09
Tnfrsf9P20334 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Tnfrsf9P20334 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf9P20334 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf9P20334 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf9P20334 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf9P20334 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC15.6■□□□□ 0.09
Tnfrsf9P20334 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf9P20334 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf9P20334 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf9P20334 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.6■□□□□ 0.09
Tnfrsf9P20334 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.6■□□□□ 0.09
Tnfrsf9P20334 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.6■□□□□ 0.09
Tnfrsf9P20334 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf9P20334 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Tnfrsf9P20334 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf9P20334 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf9P20334 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf9P20334 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Tnfrsf9P20334 Gm44949-201ENSMUST00000206423 1450 ntBASIC15.59■□□□□ 0.09
Tnfrsf9P20334 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.59■□□□□ 0.09
Tnfrsf9P20334 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf9P20334 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf9P20334 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf9P20334 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf9P20334 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Tnfrsf9P20334 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf9P20334 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf9P20334 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Tnfrsf9P20334 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf9P20334 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.59■□□□□ 0.09
Tnfrsf9P20334 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf9P20334 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf9P20334 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf9P20334 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf9P20334 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Tnfrsf9P20334 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf9P20334 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnfrsf9P20334 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tnfrsf9P20334 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tnfrsf9P20334 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tnfrsf9P20334 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tnfrsf9P20334 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnfrsf9P20334 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnfrsf9P20334 Gm11421-201ENSMUST00000122124 294 ntBASIC15.58■□□□□ 0.08
Tnfrsf9P20334 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnfrsf9P20334 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.58■□□□□ 0.08
Tnfrsf9P20334 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.58■□□□□ 0.08
Tnfrsf9P20334 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnfrsf9P20334 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnfrsf9P20334 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnfrsf9P20334 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnfrsf9P20334 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tnfrsf9P20334 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Tnfrsf9P20334 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnfrsf9P20334 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tnfrsf9P20334 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tnfrsf9P20334 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tnfrsf9P20334 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tnfrsf9P20334 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.57■□□□□ 0.08
Tnfrsf9P20334 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnfrsf9P20334 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnfrsf9P20334 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.57■□□□□ 0.08
Tnfrsf9P20334 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnfrsf9P20334 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnfrsf9P20334 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnfrsf9P20334 Rarb-207ENSMUST00000225921 2756 ntBASIC15.57■□□□□ 0.08
Tnfrsf9P20334 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.57■□□□□ 0.08
Tnfrsf9P20334 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnfrsf9P20334 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf9P20334 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf9P20334 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf9P20334 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf9P20334 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Tnfrsf9P20334 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf9P20334 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Tnfrsf9P20334 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnfrsf9P20334 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms