Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmga1P17095 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.94■□□□□ 0.78
Hmga1P17095 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Hmga1P17095 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hmga1P17095 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmga1P17095 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Hmga1P17095 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmga1P17095 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hmga1P17095 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Hmga1P17095 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.93■□□□□ 0.78
Hmga1P17095 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.93■□□□□ 0.78
Hmga1P17095 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmga1P17095 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmga1P17095 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hmga1P17095 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Hmga1P17095 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmga1P17095 Gm12933-201ENSMUST00000120203 872 ntBASIC19.92■□□□□ 0.78
Hmga1P17095 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Hmga1P17095 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Hmga1P17095 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.92■□□□□ 0.78
Hmga1P17095 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmga1P17095 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hmga1P17095 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hmga1P17095 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmga1P17095 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmga1P17095 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Hmga1P17095 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmga1P17095 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Hmga1P17095 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Hmga1P17095 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Hmga1P17095 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmga1P17095 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmga1P17095 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hmga1P17095 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
Hmga1P17095 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmga1P17095 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmga1P17095 Gm13534-201ENSMUST00000121169 513 ntBASIC19.9■□□□□ 0.78
Hmga1P17095 Gm7860-201ENSMUST00000121190 879 ntBASIC19.9■□□□□ 0.78
Hmga1P17095 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Hmga1P17095 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
Hmga1P17095 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmga1P17095 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hmga1P17095 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Hmga1P17095 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmga1P17095 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hmga1P17095 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hmga1P17095 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.89■□□□□ 0.77
Hmga1P17095 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Hmga1P17095 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hmga1P17095 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Hmga1P17095 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmga1P17095 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmga1P17095 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.88■□□□□ 0.77
Hmga1P17095 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmga1P17095 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.88■□□□□ 0.77
Hmga1P17095 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.88■□□□□ 0.77
Hmga1P17095 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.88■□□□□ 0.77
Hmga1P17095 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.88■□□□□ 0.77
Hmga1P17095 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmga1P17095 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmga1P17095 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Hmga1P17095 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.88■□□□□ 0.77
Hmga1P17095 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Hmga1P17095 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hmga1P17095 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.88■□□□□ 0.77
Hmga1P17095 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmga1P17095 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Hmga1P17095 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmga1P17095 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmga1P17095 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.87■□□□□ 0.77
Hmga1P17095 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmga1P17095 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Hmga1P17095 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmga1P17095 Gm10602-201ENSMUST00000098239 609 ntBASIC19.87■□□□□ 0.77
Hmga1P17095 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Hmga1P17095 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmga1P17095 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmga1P17095 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmga1P17095 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmga1P17095 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.86■□□□□ 0.77
Hmga1P17095 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmga1P17095 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.86■□□□□ 0.77
Hmga1P17095 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Hmga1P17095 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmga1P17095 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hmga1P17095 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Hmga1P17095 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmga1P17095 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Hmga1P17095 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmga1P17095 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmga1P17095 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.85■□□□□ 0.77
Hmga1P17095 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hmga1P17095 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmga1P17095 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmga1P17095 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmga1P17095 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Hmga1P17095 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Hmga1P17095 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.84■□□□□ 0.77
Hmga1P17095 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hmga1P17095 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms