Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Ercc1P07903 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ercc1P07903 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ercc1P07903 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ercc1P07903 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC16.18■□□□□ 0.18
Ercc1P07903 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ercc1P07903 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ercc1P07903 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ercc1P07903 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.18■□□□□ 0.18
Ercc1P07903 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ercc1P07903 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ercc1P07903 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ercc1P07903 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ercc1P07903 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ercc1P07903 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ercc1P07903 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ercc1P07903 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ercc1P07903 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Ercc1P07903 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ercc1P07903 Golph3-205ENSMUST00000228671 2842 ntBASIC16.17■□□□□ 0.18
Ercc1P07903 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ercc1P07903 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ercc1P07903 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ercc1P07903 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.17■□□□□ 0.18
Ercc1P07903 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.17■□□□□ 0.18
Ercc1P07903 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ercc1P07903 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ercc1P07903 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ercc1P07903 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Ercc1P07903 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ercc1P07903 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ercc1P07903 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Ercc1P07903 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.16■□□□□ 0.18
Ercc1P07903 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ercc1P07903 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ercc1P07903 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ercc1P07903 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.16■□□□□ 0.18
Ercc1P07903 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Ercc1P07903 Mir6236-201ENSMUST00000184437 123 ntBASIC16.16■□□□□ 0.18
Ercc1P07903 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ercc1P07903 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ercc1P07903 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ercc1P07903 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.15■□□□□ 0.18
Ercc1P07903 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc1P07903 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ercc1P07903 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc1P07903 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc1P07903 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc1P07903 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ercc1P07903 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc1P07903 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Ercc1P07903 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc1P07903 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc1P07903 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc1P07903 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.15■□□□□ 0.18
Ercc1P07903 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ercc1P07903 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Ercc1P07903 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc1P07903 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc1P07903 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc1P07903 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc1P07903 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc1P07903 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc1P07903 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ercc1P07903 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc1P07903 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc1P07903 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ercc1P07903 Gm10232-201ENSMUST00000089221 720 ntBASIC16.14■□□□□ 0.17
Ercc1P07903 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ercc1P07903 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc1P07903 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc1P07903 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ercc1P07903 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc1P07903 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc1P07903 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc1P07903 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc1P07903 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc1P07903 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.13■□□□□ 0.17
Ercc1P07903 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc1P07903 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc1P07903 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Ercc1P07903 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc1P07903 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.13■□□□□ 0.17
Ercc1P07903 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc1P07903 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc1P07903 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc1P07903 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ercc1P07903 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ercc1P07903 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.12■□□□□ 0.17
Ercc1P07903 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ercc1P07903 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ercc1P07903 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.12■□□□□ 0.17
Ercc1P07903 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ercc1P07903 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ercc1P07903 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ercc1P07903 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ercc1P07903 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.12■□□□□ 0.17
Ercc1P07903 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ercc1P07903 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ercc1P07903 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms