Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC12.24□□□□□ -0.45
P06320 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
P06320 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06320 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06320 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06320 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
P06320 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06320 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06320 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06320 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06320 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06320 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
P06320 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06320 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06320 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06320 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06320 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06320 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC12.23□□□□□ -0.45
P06320 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06320 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06320 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06320 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC12.23□□□□□ -0.45
P06320 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P06320 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06320 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06320 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06320 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06320 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06320 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06320 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
P06320 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06320 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06320 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
P06320 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P06320 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06320 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
P06320 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC12.22□□□□□ -0.45
P06320 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06320 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06320 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06320 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
P06320 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC12.22□□□□□ -0.45
P06320 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06320 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P06320 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P06320 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P06320 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06320 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
P06320 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06320 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06320 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
P06320 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06320 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
P06320 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
P06320 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
P06320 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC12.21□□□□□ -0.45
P06320 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06320 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06320 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
P06320 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06320 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06320 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06320 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
P06320 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06320 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
P06320 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
P06320 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
P06320 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
P06320 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC12.21□□□□□ -0.45
P06320 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC12.21□□□□□ -0.45
P06320 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06320 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
P06320 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06320 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
P06320 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06320 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
P06320 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
P06320 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
P06320 Golph3-205ENSMUST00000228671 2842 ntBASIC12.2□□□□□ -0.46
P06320 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06320 Gm28536-201ENSMUST00000190971 1317 ntBASIC12.2□□□□□ -0.46
P06320 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06320 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06320 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06320 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
P06320 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06320 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC12.2□□□□□ -0.46
P06320 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06320 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
P06320 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06320 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06320 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
P06320 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
P06320 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC12.2□□□□□ -0.46
P06320 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06320 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06320 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
P06320 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06320 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
P06320 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms