Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
IghmP01872 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.18■□□□□ 0.5
IghmP01872 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
IghmP01872 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.18■□□□□ 0.5
IghmP01872 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IghmP01872 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IghmP01872 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
IghmP01872 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IghmP01872 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IghmP01872 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IghmP01872 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
IghmP01872 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.17■□□□□ 0.5
IghmP01872 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
IghmP01872 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.17■□□□□ 0.5
IghmP01872 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.17■□□□□ 0.5
IghmP01872 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
IghmP01872 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IghmP01872 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
IghmP01872 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.17■□□□□ 0.5
IghmP01872 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
IghmP01872 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IghmP01872 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IghmP01872 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IghmP01872 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.16■□□□□ 0.5
IghmP01872 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
IghmP01872 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.16■□□□□ 0.5
IghmP01872 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IghmP01872 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IghmP01872 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
IghmP01872 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IghmP01872 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.16■□□□□ 0.5
IghmP01872 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IghmP01872 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IghmP01872 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IghmP01872 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IghmP01872 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
IghmP01872 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IghmP01872 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.15■□□□□ 0.5
IghmP01872 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
IghmP01872 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
IghmP01872 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IghmP01872 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IghmP01872 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
IghmP01872 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IghmP01872 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
IghmP01872 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
IghmP01872 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
IghmP01872 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
IghmP01872 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IghmP01872 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
IghmP01872 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
IghmP01872 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.14■□□□□ 0.49
IghmP01872 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IghmP01872 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
IghmP01872 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IghmP01872 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IghmP01872 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IghmP01872 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
IghmP01872 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
IghmP01872 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
IghmP01872 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IghmP01872 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
IghmP01872 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
IghmP01872 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
IghmP01872 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IghmP01872 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.13■□□□□ 0.49
IghmP01872 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
IghmP01872 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IghmP01872 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IghmP01872 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IghmP01872 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.13■□□□□ 0.49
IghmP01872 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.13■□□□□ 0.49
IghmP01872 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
IghmP01872 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IghmP01872 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IghmP01872 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
IghmP01872 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IghmP01872 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
IghmP01872 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
IghmP01872 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IghmP01872 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IghmP01872 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IghmP01872 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IghmP01872 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
IghmP01872 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.12■□□□□ 0.49
IghmP01872 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IghmP01872 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
IghmP01872 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IghmP01872 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.12■□□□□ 0.49
IghmP01872 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
IghmP01872 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
IghmP01872 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
IghmP01872 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IghmP01872 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IghmP01872 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IghmP01872 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
IghmP01872 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IghmP01872 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.11■□□□□ 0.49
IghmP01872 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IghmP01872 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms