Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Cacna1hO88427 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1hO88427 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1hO88427 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1hO88427 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1hO88427 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cacna1hO88427 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Cacna1hO88427 Gm25925-201ENSMUST00000158314 306 ntBASIC19.12■□□□□ 0.65
Cacna1hO88427 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.12■□□□□ 0.65
Cacna1hO88427 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1hO88427 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1hO88427 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Cacna1hO88427 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Cacna1hO88427 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1hO88427 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1hO88427 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1hO88427 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1hO88427 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cacna1hO88427 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.11■□□□□ 0.65
Cacna1hO88427 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.1■□□□□ 0.65
Cacna1hO88427 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Cacna1hO88427 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1hO88427 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.1■□□□□ 0.65
Cacna1hO88427 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1hO88427 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cacna1hO88427 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1hO88427 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1hO88427 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cacna1hO88427 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Cacna1hO88427 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.09■□□□□ 0.65
Cacna1hO88427 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.08■□□□□ 0.65
Cacna1hO88427 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacna1hO88427 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.65
Cacna1hO88427 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacna1hO88427 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Cacna1hO88427 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cacna1hO88427 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.08■□□□□ 0.64
Cacna1hO88427 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacna1hO88427 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacna1hO88427 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cacna1hO88427 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cacna1hO88427 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacna1hO88427 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cacna1hO88427 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1hO88427 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
Cacna1hO88427 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Cacna1hO88427 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1hO88427 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1hO88427 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Cacna1hO88427 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.07■□□□□ 0.64
Cacna1hO88427 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1hO88427 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cacna1hO88427 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1hO88427 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1hO88427 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1hO88427 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1hO88427 Gm5417-201ENSMUST00000079706 384 ntBASIC19.06■□□□□ 0.64
Cacna1hO88427 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1hO88427 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Cacna1hO88427 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cacna1hO88427 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1hO88427 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Cacna1hO88427 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.06■□□□□ 0.64
Cacna1hO88427 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Cacna1hO88427 Ank2-226ENSMUST00000189368 339 ntBASIC19.05■□□□□ 0.64
Cacna1hO88427 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cacna1hO88427 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.05■□□□□ 0.64
Cacna1hO88427 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.05■□□□□ 0.64
Cacna1hO88427 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.05■□□□□ 0.64
Cacna1hO88427 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Cacna1hO88427 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cacna1hO88427 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cacna1hO88427 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cacna1hO88427 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cacna1hO88427 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Cacna1hO88427 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Cacna1hO88427 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.04■□□□□ 0.64
Cacna1hO88427 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Cacna1hO88427 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.04■□□□□ 0.64
Cacna1hO88427 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cacna1hO88427 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.03■□□□□ 0.64
Cacna1hO88427 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Cacna1hO88427 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.03■□□□□ 0.64
Cacna1hO88427 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cacna1hO88427 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cacna1hO88427 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cacna1hO88427 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cacna1hO88427 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.03■□□□□ 0.64
Cacna1hO88427 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Cacna1hO88427 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cacna1hO88427 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.02■□□□□ 0.64
Cacna1hO88427 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
Cacna1hO88427 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cacna1hO88427 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cacna1hO88427 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cacna1hO88427 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cacna1hO88427 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.01■□□□□ 0.63
Cacna1hO88427 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.01■□□□□ 0.63
Cacna1hO88427 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.01■□□□□ 0.63
Cacna1hO88427 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms