Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tulp3O88413 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tulp3O88413 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.05■□□□□ 0.48
Tulp3O88413 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tulp3O88413 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tulp3O88413 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tulp3O88413 Etf1-202ENSMUST00000180351 108 ntBASIC18.04■□□□□ 0.48
Tulp3O88413 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.04■□□□□ 0.48
Tulp3O88413 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tulp3O88413 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Tulp3O88413 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tulp3O88413 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.04■□□□□ 0.48
Tulp3O88413 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tulp3O88413 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Tulp3O88413 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Tulp3O88413 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Tulp3O88413 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Tulp3O88413 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Tulp3O88413 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Tulp3O88413 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tulp3O88413 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tulp3O88413 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Tulp3O88413 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tulp3O88413 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tulp3O88413 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Tulp3O88413 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tulp3O88413 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.02■□□□□ 0.48
Tulp3O88413 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
Tulp3O88413 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Tulp3O88413 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Tulp3O88413 AA386476-201ENSMUST00000098781 1665 ntBASIC18.02■□□□□ 0.47
Tulp3O88413 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.02■□□□□ 0.47
Tulp3O88413 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tulp3O88413 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tulp3O88413 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.01■□□□□ 0.47
Tulp3O88413 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Tulp3O88413 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tulp3O88413 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.01■□□□□ 0.47
Tulp3O88413 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.01■□□□□ 0.47
Tulp3O88413 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tulp3O88413 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Tulp3O88413 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tulp3O88413 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Tulp3O88413 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tulp3O88413 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Tulp3O88413 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Tulp3O88413 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tulp3O88413 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18■□□□□ 0.47
Tulp3O88413 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Tulp3O88413 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18■□□□□ 0.47
Tulp3O88413 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Tulp3O88413 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tulp3O88413 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Tulp3O88413 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Tulp3O88413 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tulp3O88413 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tulp3O88413 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tulp3O88413 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tulp3O88413 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Tulp3O88413 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.99■□□□□ 0.47
Tulp3O88413 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.99■□□□□ 0.47
Tulp3O88413 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Tulp3O88413 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tulp3O88413 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tulp3O88413 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tulp3O88413 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tulp3O88413 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tulp3O88413 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tulp3O88413 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tulp3O88413 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tulp3O88413 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tulp3O88413 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tulp3O88413 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tulp3O88413 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tulp3O88413 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tulp3O88413 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tulp3O88413 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Tulp3O88413 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tulp3O88413 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tulp3O88413 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tulp3O88413 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tulp3O88413 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.98■□□□□ 0.47
Tulp3O88413 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Tulp3O88413 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.98■□□□□ 0.47
Tulp3O88413 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
Tulp3O88413 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Tulp3O88413 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tulp3O88413 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tulp3O88413 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tulp3O88413 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tulp3O88413 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tulp3O88413 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tulp3O88413 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Tulp3O88413 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.97■□□□□ 0.47
Tulp3O88413 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tulp3O88413 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tulp3O88413 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Tulp3O88413 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.97■□□□□ 0.47
Tulp3O88413 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tulp3O88413 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms