Protein–RNA interactions for Protein: O55111

Dsg2, Desmoglein-2, mousemouse

Predictions only

Length 1,122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dsg2O55111 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dsg2O55111 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dsg2O55111 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Dsg2O55111 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Dsg2O55111 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.16■□□□□ 0.66
Dsg2O55111 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Dsg2O55111 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.16■□□□□ 0.66
Dsg2O55111 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Dsg2O55111 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.16■□□□□ 0.66
Dsg2O55111 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.16■□□□□ 0.66
Dsg2O55111 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dsg2O55111 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Dsg2O55111 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dsg2O55111 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dsg2O55111 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Dsg2O55111 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Dsg2O55111 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
Dsg2O55111 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Dsg2O55111 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dsg2O55111 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.15■□□□□ 0.66
Dsg2O55111 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.15■□□□□ 0.66
Dsg2O55111 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.15■□□□□ 0.66
Dsg2O55111 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.15■□□□□ 0.66
Dsg2O55111 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Dsg2O55111 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Dsg2O55111 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dsg2O55111 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Dsg2O55111 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Dsg2O55111 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Dsg2O55111 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Dsg2O55111 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Dsg2O55111 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dsg2O55111 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dsg2O55111 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dsg2O55111 Gm27011-201ENSMUST00000182352 972 ntBASIC19.14■□□□□ 0.65
Dsg2O55111 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dsg2O55111 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dsg2O55111 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.14■□□□□ 0.65
Dsg2O55111 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Dsg2O55111 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Dsg2O55111 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Dsg2O55111 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Dsg2O55111 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Dsg2O55111 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Dsg2O55111 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dsg2O55111 Gm37444-201ENSMUST00000193605 439 ntBASIC19.13■□□□□ 0.65
Dsg2O55111 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Dsg2O55111 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Dsg2O55111 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Dsg2O55111 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Dsg2O55111 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dsg2O55111 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Dsg2O55111 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.12■□□□□ 0.65
Dsg2O55111 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Dsg2O55111 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.12■□□□□ 0.65
Dsg2O55111 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Dsg2O55111 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dsg2O55111 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Dsg2O55111 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dsg2O55111 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dsg2O55111 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.11■□□□□ 0.65
Dsg2O55111 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dsg2O55111 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dsg2O55111 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.11■□□□□ 0.65
Dsg2O55111 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.11■□□□□ 0.65
Dsg2O55111 Gm7290-201ENSMUST00000104990 617 ntBASIC19.11■□□□□ 0.65
Dsg2O55111 Gm12918-201ENSMUST00000120234 636 ntBASIC19.11■□□□□ 0.65
Dsg2O55111 Gm15710-201ENSMUST00000121821 636 ntBASIC19.11■□□□□ 0.65
Dsg2O55111 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.11■□□□□ 0.65
Dsg2O55111 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.11■□□□□ 0.65
Dsg2O55111 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.11■□□□□ 0.65
Dsg2O55111 Gm5075-201ENSMUST00000196916 622 ntBASIC19.11■□□□□ 0.65
Dsg2O55111 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dsg2O55111 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Dsg2O55111 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.11■□□□□ 0.65
Dsg2O55111 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.11■□□□□ 0.65
Dsg2O55111 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Dsg2O55111 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Dsg2O55111 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.11■□□□□ 0.65
Dsg2O55111 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
Dsg2O55111 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dsg2O55111 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dsg2O55111 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dsg2O55111 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dsg2O55111 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dsg2O55111 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dsg2O55111 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dsg2O55111 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.1■□□□□ 0.65
Dsg2O55111 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Dsg2O55111 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dsg2O55111 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Dsg2O55111 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.1■□□□□ 0.65
Dsg2O55111 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Dsg2O55111 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Dsg2O55111 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dsg2O55111 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dsg2O55111 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.1■□□□□ 0.65
Dsg2O55111 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Dsg2O55111 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Dsg2O55111 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms