Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1bO55017 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.78■□□□□ 0.6
Cacna1bO55017 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.78■□□□□ 0.6
Cacna1bO55017 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.78■□□□□ 0.6
Cacna1bO55017 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1bO55017 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1bO55017 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1bO55017 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1bO55017 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cacna1bO55017 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.77■□□□□ 0.6
Cacna1bO55017 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.77■□□□□ 0.6
Cacna1bO55017 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.77■□□□□ 0.6
Cacna1bO55017 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.77■□□□□ 0.6
Cacna1bO55017 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1bO55017 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cacna1bO55017 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cacna1bO55017 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cacna1bO55017 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cacna1bO55017 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Cacna1bO55017 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cacna1bO55017 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cacna1bO55017 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.76■□□□□ 0.59
Cacna1bO55017 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1bO55017 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Cacna1bO55017 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1bO55017 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1bO55017 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cacna1bO55017 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1bO55017 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cacna1bO55017 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cacna1bO55017 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.75■□□□□ 0.59
Cacna1bO55017 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.75■□□□□ 0.59
Cacna1bO55017 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1bO55017 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1bO55017 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cacna1bO55017 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cacna1bO55017 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cacna1bO55017 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1bO55017 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cacna1bO55017 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1bO55017 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cacna1bO55017 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1bO55017 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cacna1bO55017 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1bO55017 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1bO55017 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1bO55017 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cacna1bO55017 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cacna1bO55017 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cacna1bO55017 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cacna1bO55017 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cacna1bO55017 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cacna1bO55017 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cacna1bO55017 Dio3-201ENSMUST00000097228 1449 ntBASIC18.73■□□□□ 0.59
Cacna1bO55017 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Cacna1bO55017 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC18.73■□□□□ 0.59
Cacna1bO55017 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cacna1bO55017 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.73■□□□□ 0.59
Cacna1bO55017 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.72■□□□□ 0.59
Cacna1bO55017 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Cacna1bO55017 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cacna1bO55017 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacna1bO55017 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacna1bO55017 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.72■□□□□ 0.59
Cacna1bO55017 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacna1bO55017 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacna1bO55017 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.72■□□□□ 0.59
Cacna1bO55017 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cacna1bO55017 Gm27275-201ENSMUST00000184318 272 ntBASIC18.72■□□□□ 0.59
Cacna1bO55017 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.72■□□□□ 0.59
Cacna1bO55017 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cacna1bO55017 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Cacna1bO55017 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1bO55017 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1bO55017 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1bO55017 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1bO55017 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1bO55017 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1bO55017 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1bO55017 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.71■□□□□ 0.59
Cacna1bO55017 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1bO55017 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cacna1bO55017 Gm13836-201ENSMUST00000121159 501 ntBASIC18.71■□□□□ 0.58
Cacna1bO55017 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.71■□□□□ 0.58
Cacna1bO55017 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cacna1bO55017 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Cacna1bO55017 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Cacna1bO55017 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.7■□□□□ 0.58
Cacna1bO55017 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1bO55017 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1bO55017 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1bO55017 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Cacna1bO55017 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1bO55017 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1bO55017 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1bO55017 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cacna1bO55017 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1bO55017 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna1bO55017 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cacna1bO55017 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms