Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rnf13O54965 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf13O54965 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Rnf13O54965 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf13O54965 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rnf13O54965 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Rnf13O54965 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rnf13O54965 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf13O54965 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf13O54965 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.52■□□□□ 0.4
Rnf13O54965 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.52■□□□□ 0.4
Rnf13O54965 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rnf13O54965 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf13O54965 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Rnf13O54965 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rnf13O54965 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf13O54965 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rnf13O54965 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rnf13O54965 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf13O54965 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Rnf13O54965 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.51■□□□□ 0.39
Rnf13O54965 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf13O54965 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rnf13O54965 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rnf13O54965 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf13O54965 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf13O54965 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf13O54965 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf13O54965 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.5■□□□□ 0.39
Rnf13O54965 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.5■□□□□ 0.39
Rnf13O54965 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf13O54965 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf13O54965 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rnf13O54965 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf13O54965 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf13O54965 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rnf13O54965 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf13O54965 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf13O54965 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rnf13O54965 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.49■□□□□ 0.39
Rnf13O54965 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf13O54965 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Rnf13O54965 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rnf13O54965 Etf1-202ENSMUST00000180351 108 ntBASIC17.49■□□□□ 0.39
Rnf13O54965 Gm7417-201ENSMUST00000192950 473 ntBASIC17.49■□□□□ 0.39
Rnf13O54965 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf13O54965 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf13O54965 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rnf13O54965 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf13O54965 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf13O54965 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf13O54965 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.49■□□□□ 0.39
Rnf13O54965 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf13O54965 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf13O54965 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rnf13O54965 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf13O54965 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf13O54965 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf13O54965 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rnf13O54965 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.49■□□□□ 0.39
Rnf13O54965 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf13O54965 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf13O54965 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf13O54965 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rnf13O54965 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf13O54965 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf13O54965 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf13O54965 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.48■□□□□ 0.39
Rnf13O54965 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.48■□□□□ 0.39
Rnf13O54965 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf13O54965 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf13O54965 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf13O54965 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rnf13O54965 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rnf13O54965 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf13O54965 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rnf13O54965 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.47■□□□□ 0.39
Rnf13O54965 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.47■□□□□ 0.39
Rnf13O54965 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf13O54965 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf13O54965 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf13O54965 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Rnf13O54965 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf13O54965 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Rnf13O54965 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rnf13O54965 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf13O54965 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf13O54965 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf13O54965 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rnf13O54965 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf13O54965 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Rnf13O54965 AA386476-201ENSMUST00000098781 1665 ntBASIC17.46■□□□□ 0.39
Rnf13O54965 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf13O54965 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf13O54965 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf13O54965 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf13O54965 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rnf13O54965 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.46■□□□□ 0.39
Rnf13O54965 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rnf13O54965 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms