Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Sdc4O35988 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.98■□□□□ 0.79
Sdc4O35988 Gm37179-201ENSMUST00000194862 823 ntBASIC19.98■□□□□ 0.79
Sdc4O35988 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc4O35988 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Sdc4O35988 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Sdc4O35988 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Sdc4O35988 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc4O35988 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc4O35988 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc4O35988 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc4O35988 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.97■□□□□ 0.79
Sdc4O35988 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.97■□□□□ 0.79
Sdc4O35988 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.97■□□□□ 0.79
Sdc4O35988 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc4O35988 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc4O35988 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc4O35988 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.97■□□□□ 0.79
Sdc4O35988 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc4O35988 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc4O35988 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Sdc4O35988 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdc4O35988 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdc4O35988 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sdc4O35988 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdc4O35988 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sdc4O35988 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.96■□□□□ 0.79
Sdc4O35988 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Sdc4O35988 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.96■□□□□ 0.79
Sdc4O35988 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdc4O35988 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.96■□□□□ 0.79
Sdc4O35988 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Sdc4O35988 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdc4O35988 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdc4O35988 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Sdc4O35988 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdc4O35988 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.95■□□□□ 0.78
Sdc4O35988 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.95■□□□□ 0.78
Sdc4O35988 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.95■□□□□ 0.78
Sdc4O35988 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdc4O35988 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Sdc4O35988 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc4O35988 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc4O35988 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc4O35988 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc4O35988 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc4O35988 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc4O35988 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc4O35988 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc4O35988 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Sdc4O35988 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdc4O35988 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdc4O35988 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdc4O35988 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Sdc4O35988 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdc4O35988 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Sdc4O35988 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sdc4O35988 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.93■□□□□ 0.78
Sdc4O35988 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.93■□□□□ 0.78
Sdc4O35988 Gm29257-201ENSMUST00000186115 639 ntBASIC19.93■□□□□ 0.78
Sdc4O35988 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.93■□□□□ 0.78
Sdc4O35988 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdc4O35988 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdc4O35988 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Sdc4O35988 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Sdc4O35988 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Sdc4O35988 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Sdc4O35988 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Sdc4O35988 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc4O35988 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc4O35988 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.92■□□□□ 0.78
Sdc4O35988 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc4O35988 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc4O35988 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc4O35988 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc4O35988 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Sdc4O35988 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Sdc4O35988 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc4O35988 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sdc4O35988 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc4O35988 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.91■□□□□ 0.78
Sdc4O35988 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.91■□□□□ 0.78
Sdc4O35988 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc4O35988 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc4O35988 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc4O35988 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Sdc4O35988 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc4O35988 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc4O35988 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc4O35988 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sdc4O35988 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc4O35988 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Sdc4O35988 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.9■□□□□ 0.78
Sdc4O35988 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc4O35988 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc4O35988 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.9■□□□□ 0.78
Sdc4O35988 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.9■□□□□ 0.78
Sdc4O35988 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc4O35988 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sdc4O35988 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms