Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Polr1aO35134 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Polr1aO35134 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC30.33■■■□□ 2.45
Polr1aO35134 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
Polr1aO35134 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
Polr1aO35134 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Polr1aO35134 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Polr1aO35134 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
Polr1aO35134 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Polr1aO35134 Gm12504-201ENSMUST00000120860 2231 ntBASIC30.31■■■□□ 2.44
Polr1aO35134 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC30.31■■■□□ 2.44
Polr1aO35134 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
Polr1aO35134 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Polr1aO35134 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC30.31■■■□□ 2.44
Polr1aO35134 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Polr1aO35134 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Polr1aO35134 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC30.3■■■□□ 2.44
Polr1aO35134 Gm10812-201ENSMUST00000099864 546 ntBASIC30.3■■■□□ 2.44
Polr1aO35134 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
Polr1aO35134 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Polr1aO35134 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
Polr1aO35134 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Polr1aO35134 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Polr1aO35134 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Polr1aO35134 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Polr1aO35134 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Polr1aO35134 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC30.29■■■□□ 2.44
Polr1aO35134 Dmtn-209ENSMUST00000228295 2572 ntBASIC30.28■■■□□ 2.44
Polr1aO35134 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Polr1aO35134 AC152827.1-201ENSMUST00000221143 2189 ntBASIC30.28■■■□□ 2.44
Polr1aO35134 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC30.28■■■□□ 2.44
Polr1aO35134 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Polr1aO35134 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Polr1aO35134 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC30.27■■■□□ 2.44
Polr1aO35134 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Polr1aO35134 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Polr1aO35134 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
Polr1aO35134 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Polr1aO35134 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Polr1aO35134 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC30.27■■■□□ 2.44
Polr1aO35134 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Polr1aO35134 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Polr1aO35134 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
Polr1aO35134 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Polr1aO35134 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Polr1aO35134 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC30.26■■■□□ 2.43
Polr1aO35134 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Polr1aO35134 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Polr1aO35134 Gm44672-201ENSMUST00000206944 1098 ntBASIC30.25■■■□□ 2.43
Polr1aO35134 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Polr1aO35134 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC30.25■■■□□ 2.43
Polr1aO35134 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Polr1aO35134 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Polr1aO35134 Gm27275-201ENSMUST00000184318 272 ntBASIC30.25■■■□□ 2.43
Polr1aO35134 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Polr1aO35134 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Polr1aO35134 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Polr1aO35134 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
Polr1aO35134 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
Polr1aO35134 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC30.24■■■□□ 2.43
Polr1aO35134 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Polr1aO35134 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Polr1aO35134 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Polr1aO35134 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Polr1aO35134 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Polr1aO35134 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC30.22■■■□□ 2.43
Polr1aO35134 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
Polr1aO35134 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Polr1aO35134 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Polr1aO35134 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Polr1aO35134 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Polr1aO35134 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Polr1aO35134 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Polr1aO35134 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
Polr1aO35134 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
Polr1aO35134 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Polr1aO35134 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Polr1aO35134 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Polr1aO35134 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC30.21■■■□□ 2.43
Polr1aO35134 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC30.2■■■□□ 2.43
Polr1aO35134 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Polr1aO35134 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
Polr1aO35134 Gm13509-201ENSMUST00000119733 1308 ntBASIC30.2■■■□□ 2.42
Polr1aO35134 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC30.19■■■□□ 2.42
Polr1aO35134 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC30.19■■■□□ 2.42
Polr1aO35134 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Polr1aO35134 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Polr1aO35134 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Polr1aO35134 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
Polr1aO35134 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Polr1aO35134 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Polr1aO35134 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC30.18■■■□□ 2.42
Polr1aO35134 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Polr1aO35134 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Polr1aO35134 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
Polr1aO35134 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC30.16■■■□□ 2.42
Polr1aO35134 Gm6802-201ENSMUST00000167843 1983 ntBASIC30.16■■■□□ 2.42
Polr1aO35134 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
Polr1aO35134 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC30.14■■■□□ 2.42
Polr1aO35134 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms