Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Gm5913-201ENSMUST00000119397 1399 ntBASIC12.5□□□□□ -0.41
Pkd1O08852 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Pkd1O08852 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pkd1O08852 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pkd1O08852 Gm10698-201ENSMUST00000182663 604 ntBASIC12.5□□□□□ -0.41
Pkd1O08852 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pkd1O08852 Gm9987-201ENSMUST00000069768 567 ntBASIC12.5□□□□□ -0.41
Pkd1O08852 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Pkd1O08852 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Pkd1O08852 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Pkd1O08852 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.5□□□□□ -0.41
Pkd1O08852 CT010444.2-201ENSMUST00000217877 1629 ntBASIC12.5□□□□□ -0.41
Pkd1O08852 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.5□□□□□ -0.41
Pkd1O08852 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pkd1O08852 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pkd1O08852 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.49□□□□□ -0.41
Pkd1O08852 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pkd1O08852 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC12.49□□□□□ -0.41
Pkd1O08852 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC12.49□□□□□ -0.41
Pkd1O08852 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pkd1O08852 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pkd1O08852 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pkd1O08852 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pkd1O08852 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC12.49□□□□□ -0.41
Pkd1O08852 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pkd1O08852 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pkd1O08852 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pkd1O08852 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pkd1O08852 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pkd1O08852 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.48□□□□□ -0.41
Pkd1O08852 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pkd1O08852 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pkd1O08852 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pkd1O08852 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC12.48□□□□□ -0.41
Pkd1O08852 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pkd1O08852 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pkd1O08852 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.48□□□□□ -0.41
Pkd1O08852 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pkd1O08852 Gm6576-201ENSMUST00000169678 883 ntBASIC12.48□□□□□ -0.41
Pkd1O08852 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.48□□□□□ -0.41
Pkd1O08852 AC122428.2-201ENSMUST00000216321 1832 ntBASIC12.48□□□□□ -0.41
Pkd1O08852 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pkd1O08852 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.48□□□□□ -0.41
Pkd1O08852 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pkd1O08852 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pkd1O08852 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pkd1O08852 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pkd1O08852 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pkd1O08852 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pkd1O08852 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pkd1O08852 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pkd1O08852 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pkd1O08852 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pkd1O08852 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pkd1O08852 Arhgef33-211ENSMUST00000225658 473 ntBASIC12.47□□□□□ -0.41
Pkd1O08852 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pkd1O08852 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pkd1O08852 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pkd1O08852 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pkd1O08852 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pkd1O08852 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pkd1O08852 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pkd1O08852 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pkd1O08852 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pkd1O08852 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.46□□□□□ -0.41
Pkd1O08852 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pkd1O08852 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pkd1O08852 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pkd1O08852 Mir1199-201ENSMUST00000117015 119 ntBASIC12.46□□□□□ -0.41
Pkd1O08852 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.46□□□□□ -0.42
Pkd1O08852 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pkd1O08852 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
Pkd1O08852 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pkd1O08852 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pkd1O08852 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pkd1O08852 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.45□□□□□ -0.42
Pkd1O08852 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pkd1O08852 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.45□□□□□ -0.42
Pkd1O08852 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pkd1O08852 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pkd1O08852 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pkd1O08852 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Pkd1O08852 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Pkd1O08852 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pkd1O08852 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pkd1O08852 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pkd1O08852 AC153881.2-201ENSMUST00000214877 204 ntBASIC12.45□□□□□ -0.42
Pkd1O08852 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pkd1O08852 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pkd1O08852 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pkd1O08852 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
Pkd1O08852 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pkd1O08852 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Pkd1O08852 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pkd1O08852 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pkd1O08852 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pkd1O08852 Gm37055-201ENSMUST00000191866 133 ntBASIC12.44□□□□□ -0.42
Pkd1O08852 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pkd1O08852 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Pkd1O08852 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms