Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Tnfrsf11bO08712 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
Tnfrsf11bO08712 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Tnfrsf11bO08712 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf11bO08712 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf11bO08712 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.65■□□□□ 0.74
Tnfrsf11bO08712 Serp2-204ENSMUST00000228055 705 ntBASIC19.65■□□□□ 0.74
Tnfrsf11bO08712 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf11bO08712 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf11bO08712 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf11bO08712 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf11bO08712 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Tnfrsf11bO08712 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Tnfrsf11bO08712 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf11bO08712 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf11bO08712 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf11bO08712 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf11bO08712 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf11bO08712 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf11bO08712 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Tnfrsf11bO08712 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf11bO08712 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf11bO08712 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf11bO08712 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf11bO08712 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf11bO08712 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf11bO08712 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf11bO08712 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Tnfrsf11bO08712 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Tnfrsf11bO08712 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf11bO08712 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Tnfrsf11bO08712 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Tnfrsf11bO08712 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf11bO08712 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf11bO08712 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.63■□□□□ 0.73
Tnfrsf11bO08712 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.63■□□□□ 0.73
Tnfrsf11bO08712 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf11bO08712 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf11bO08712 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Tnfrsf11bO08712 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Tnfrsf11bO08712 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.62■□□□□ 0.73
Tnfrsf11bO08712 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf11bO08712 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Tnfrsf11bO08712 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.62■□□□□ 0.73
Tnfrsf11bO08712 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf11bO08712 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf11bO08712 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf11bO08712 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf11bO08712 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf11bO08712 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf11bO08712 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf11bO08712 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Tnfrsf11bO08712 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf11bO08712 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Tnfrsf11bO08712 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf11bO08712 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf11bO08712 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf11bO08712 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Tnfrsf11bO08712 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf11bO08712 Gm9847-201ENSMUST00000052528 599 ntBASIC19.61■□□□□ 0.73
Tnfrsf11bO08712 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.61■□□□□ 0.73
Tnfrsf11bO08712 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf11bO08712 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf11bO08712 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf11bO08712 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Tnfrsf11bO08712 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfrsf11bO08712 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfrsf11bO08712 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Tnfrsf11bO08712 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.6■□□□□ 0.73
Tnfrsf11bO08712 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.6■□□□□ 0.73
Tnfrsf11bO08712 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.6■□□□□ 0.73
Tnfrsf11bO08712 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfrsf11bO08712 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfrsf11bO08712 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.6■□□□□ 0.73
Tnfrsf11bO08712 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfrsf11bO08712 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Tnfrsf11bO08712 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf11bO08712 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf11bO08712 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Tnfrsf11bO08712 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf11bO08712 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf11bO08712 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf11bO08712 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.59■□□□□ 0.73
Tnfrsf11bO08712 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.59■□□□□ 0.73
Tnfrsf11bO08712 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf11bO08712 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Tnfrsf11bO08712 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf11bO08712 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Tnfrsf11bO08712 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tnfrsf11bO08712 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tnfrsf11bO08712 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Tnfrsf11bO08712 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.58■□□□□ 0.73
Tnfrsf11bO08712 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Tnfrsf11bO08712 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tnfrsf11bO08712 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.58■□□□□ 0.72
Tnfrsf11bO08712 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Tnfrsf11bO08712 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.58■□□□□ 0.72
Tnfrsf11bO08712 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Tnfrsf11bO08712 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.57■□□□□ 0.72
Tnfrsf11bO08712 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms