Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
B020004C17RikJ3QP07 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
B020004C17RikJ3QP07 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
B020004C17RikJ3QP07 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
B020004C17RikJ3QP07 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
B020004C17RikJ3QP07 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
B020004C17RikJ3QP07 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
B020004C17RikJ3QP07 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
B020004C17RikJ3QP07 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.88■■□□□ 1.09
B020004C17RikJ3QP07 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
B020004C17RikJ3QP07 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
B020004C17RikJ3QP07 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
B020004C17RikJ3QP07 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
B020004C17RikJ3QP07 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
B020004C17RikJ3QP07 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
B020004C17RikJ3QP07 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.88■■□□□ 1.09
B020004C17RikJ3QP07 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
B020004C17RikJ3QP07 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
B020004C17RikJ3QP07 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.87■■□□□ 1.09
B020004C17RikJ3QP07 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
B020004C17RikJ3QP07 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
B020004C17RikJ3QP07 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.87■■□□□ 1.09
B020004C17RikJ3QP07 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.87■■□□□ 1.09
B020004C17RikJ3QP07 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
B020004C17RikJ3QP07 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
B020004C17RikJ3QP07 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
B020004C17RikJ3QP07 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
B020004C17RikJ3QP07 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
B020004C17RikJ3QP07 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
B020004C17RikJ3QP07 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
B020004C17RikJ3QP07 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
B020004C17RikJ3QP07 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
B020004C17RikJ3QP07 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
B020004C17RikJ3QP07 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
B020004C17RikJ3QP07 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
B020004C17RikJ3QP07 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
B020004C17RikJ3QP07 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
B020004C17RikJ3QP07 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
B020004C17RikJ3QP07 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
B020004C17RikJ3QP07 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
B020004C17RikJ3QP07 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
B020004C17RikJ3QP07 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
B020004C17RikJ3QP07 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
B020004C17RikJ3QP07 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
B020004C17RikJ3QP07 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
B020004C17RikJ3QP07 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
B020004C17RikJ3QP07 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
B020004C17RikJ3QP07 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
B020004C17RikJ3QP07 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
B020004C17RikJ3QP07 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
B020004C17RikJ3QP07 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
B020004C17RikJ3QP07 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
B020004C17RikJ3QP07 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
B020004C17RikJ3QP07 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
B020004C17RikJ3QP07 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
B020004C17RikJ3QP07 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
B020004C17RikJ3QP07 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
B020004C17RikJ3QP07 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.83■■□□□ 1.09
B020004C17RikJ3QP07 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
B020004C17RikJ3QP07 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
B020004C17RikJ3QP07 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
B020004C17RikJ3QP07 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
B020004C17RikJ3QP07 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
B020004C17RikJ3QP07 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
B020004C17RikJ3QP07 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
B020004C17RikJ3QP07 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
B020004C17RikJ3QP07 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
B020004C17RikJ3QP07 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
B020004C17RikJ3QP07 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
B020004C17RikJ3QP07 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
B020004C17RikJ3QP07 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
B020004C17RikJ3QP07 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
B020004C17RikJ3QP07 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.82■■□□□ 1.08
B020004C17RikJ3QP07 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
B020004C17RikJ3QP07 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
B020004C17RikJ3QP07 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
B020004C17RikJ3QP07 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
B020004C17RikJ3QP07 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
B020004C17RikJ3QP07 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
B020004C17RikJ3QP07 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.81■■□□□ 1.08
B020004C17RikJ3QP07 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.81■■□□□ 1.08
B020004C17RikJ3QP07 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
B020004C17RikJ3QP07 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
B020004C17RikJ3QP07 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
B020004C17RikJ3QP07 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
B020004C17RikJ3QP07 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
B020004C17RikJ3QP07 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
B020004C17RikJ3QP07 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
B020004C17RikJ3QP07 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
B020004C17RikJ3QP07 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
B020004C17RikJ3QP07 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
B020004C17RikJ3QP07 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
B020004C17RikJ3QP07 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.8■■□□□ 1.08
B020004C17RikJ3QP07 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
B020004C17RikJ3QP07 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
B020004C17RikJ3QP07 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
B020004C17RikJ3QP07 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.79■■□□□ 1.08
B020004C17RikJ3QP07 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
B020004C17RikJ3QP07 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
B020004C17RikJ3QP07 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms