Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trim34bJ3QNR8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim34bJ3QNR8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim34bJ3QNR8 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.79■■□□□ 1.4
Trim34bJ3QNR8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Trim34bJ3QNR8 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Trim34bJ3QNR8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Trim34bJ3QNR8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim34bJ3QNR8 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Trim34bJ3QNR8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim34bJ3QNR8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC23.78■■□□□ 1.4
Trim34bJ3QNR8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC23.78■■□□□ 1.4
Trim34bJ3QNR8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim34bJ3QNR8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC23.78■■□□□ 1.4
Trim34bJ3QNR8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
Trim34bJ3QNR8 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Trim34bJ3QNR8 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim34bJ3QNR8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim34bJ3QNR8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
Trim34bJ3QNR8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trim34bJ3QNR8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim34bJ3QNR8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC23.77■■□□□ 1.4
Trim34bJ3QNR8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.77■■□□□ 1.4
Trim34bJ3QNR8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim34bJ3QNR8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim34bJ3QNR8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim34bJ3QNR8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim34bJ3QNR8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC23.77■■□□□ 1.4
Trim34bJ3QNR8 Mir5133-201ENSMUST00000174955 77 ntBASIC23.77■■□□□ 1.4
Trim34bJ3QNR8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim34bJ3QNR8 AC112142.1-201ENSMUST00000228796 918 ntBASIC23.77■■□□□ 1.4
Trim34bJ3QNR8 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC23.77■■□□□ 1.4
Trim34bJ3QNR8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Trim34bJ3QNR8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC23.76■■□□□ 1.39
Trim34bJ3QNR8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim34bJ3QNR8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Trim34bJ3QNR8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim34bJ3QNR8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
Trim34bJ3QNR8 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim34bJ3QNR8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim34bJ3QNR8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim34bJ3QNR8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trim34bJ3QNR8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Trim34bJ3QNR8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC23.74■■□□□ 1.39
Trim34bJ3QNR8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Trim34bJ3QNR8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC23.74■■□□□ 1.39
Trim34bJ3QNR8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Trim34bJ3QNR8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim34bJ3QNR8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim34bJ3QNR8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim34bJ3QNR8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Trim34bJ3QNR8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim34bJ3QNR8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC23.74■■□□□ 1.39
Trim34bJ3QNR8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim34bJ3QNR8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Trim34bJ3QNR8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trim34bJ3QNR8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim34bJ3QNR8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC23.73■■□□□ 1.39
Trim34bJ3QNR8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC23.73■■□□□ 1.39
Trim34bJ3QNR8 Gm27011-201ENSMUST00000182352 972 ntBASIC23.73■■□□□ 1.39
Trim34bJ3QNR8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim34bJ3QNR8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Trim34bJ3QNR8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim34bJ3QNR8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim34bJ3QNR8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC23.72■■□□□ 1.39
Trim34bJ3QNR8 Gm13534-201ENSMUST00000121169 513 ntBASIC23.72■■□□□ 1.39
Trim34bJ3QNR8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC23.72■■□□□ 1.39
Trim34bJ3QNR8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC23.72■■□□□ 1.39
Trim34bJ3QNR8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC23.72■■□□□ 1.39
Trim34bJ3QNR8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Trim34bJ3QNR8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim34bJ3QNR8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim34bJ3QNR8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Trim34bJ3QNR8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC23.71■■□□□ 1.39
Trim34bJ3QNR8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim34bJ3QNR8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim34bJ3QNR8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim34bJ3QNR8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Trim34bJ3QNR8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim34bJ3QNR8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC23.7■■□□□ 1.39
Trim34bJ3QNR8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Trim34bJ3QNR8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim34bJ3QNR8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim34bJ3QNR8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim34bJ3QNR8 Gm7860-201ENSMUST00000121190 879 ntBASIC23.7■■□□□ 1.38
Trim34bJ3QNR8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Trim34bJ3QNR8 Gm6420-201ENSMUST00000193885 723 ntBASIC23.7■■□□□ 1.38
Trim34bJ3QNR8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Trim34bJ3QNR8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim34bJ3QNR8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Trim34bJ3QNR8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Trim34bJ3QNR8 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Trim34bJ3QNR8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Trim34bJ3QNR8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim34bJ3QNR8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim34bJ3QNR8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC23.69■■□□□ 1.38
Trim34bJ3QNR8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim34bJ3QNR8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Trim34bJ3QNR8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Trim34bJ3QNR8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms