Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trav13d-3J3QMG8 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trav13d-3J3QMG8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13d-3J3QMG8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13d-3J3QMG8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13d-3J3QMG8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav13d-3J3QMG8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13d-3J3QMG8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13d-3J3QMG8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav13d-3J3QMG8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.04■□□□□ 0.32
Trav13d-3J3QMG8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13d-3J3QMG8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13d-3J3QMG8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13d-3J3QMG8 Smad6-203ENSMUST00000179458 273 ntBASIC17.04■□□□□ 0.32
Trav13d-3J3QMG8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13d-3J3QMG8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13d-3J3QMG8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav13d-3J3QMG8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13d-3J3QMG8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13d-3J3QMG8 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.03■□□□□ 0.32
Trav13d-3J3QMG8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13d-3J3QMG8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.03■□□□□ 0.32
Trav13d-3J3QMG8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13d-3J3QMG8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13d-3J3QMG8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13d-3J3QMG8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13d-3J3QMG8 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13d-3J3QMG8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav13d-3J3QMG8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav13d-3J3QMG8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trav13d-3J3QMG8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Trav13d-3J3QMG8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav13d-3J3QMG8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trav13d-3J3QMG8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav13d-3J3QMG8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav13d-3J3QMG8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav13d-3J3QMG8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Trav13d-3J3QMG8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.02■□□□□ 0.32
Trav13d-3J3QMG8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav13d-3J3QMG8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav13d-3J3QMG8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav13d-3J3QMG8 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13d-3J3QMG8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13d-3J3QMG8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13d-3J3QMG8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13d-3J3QMG8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13d-3J3QMG8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav13d-3J3QMG8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17■□□□□ 0.31
Trav13d-3J3QMG8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav13d-3J3QMG8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav13d-3J3QMG8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav13d-3J3QMG8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav13d-3J3QMG8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav13d-3J3QMG8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13d-3J3QMG8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13d-3J3QMG8 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.99■□□□□ 0.31
Trav13d-3J3QMG8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13d-3J3QMG8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13d-3J3QMG8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.99■□□□□ 0.31
Trav13d-3J3QMG8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13d-3J3QMG8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
Trav13d-3J3QMG8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.99■□□□□ 0.31
Trav13d-3J3QMG8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13d-3J3QMG8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13d-3J3QMG8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trav13d-3J3QMG8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13d-3J3QMG8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13d-3J3QMG8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav13d-3J3QMG8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13d-3J3QMG8 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav13d-3J3QMG8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Trav13d-3J3QMG8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13d-3J3QMG8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13d-3J3QMG8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13d-3J3QMG8 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13d-3J3QMG8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.98■□□□□ 0.31
Trav13d-3J3QMG8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.98■□□□□ 0.31
Trav13d-3J3QMG8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav13d-3J3QMG8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13d-3J3QMG8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13d-3J3QMG8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13d-3J3QMG8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13d-3J3QMG8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13d-3J3QMG8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav13d-3J3QMG8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav13d-3J3QMG8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.98■□□□□ 0.31
Trav13d-3J3QMG8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13d-3J3QMG8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13d-3J3QMG8 Iqck-206ENSMUST00000208658 2891 ntBASIC16.97■□□□□ 0.31
Trav13d-3J3QMG8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13d-3J3QMG8 Gm11421-201ENSMUST00000122124 294 ntBASIC16.97■□□□□ 0.31
Trav13d-3J3QMG8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.97■□□□□ 0.31
Trav13d-3J3QMG8 Gm43017-201ENSMUST00000198296 752 ntBASIC16.97■□□□□ 0.31
Trav13d-3J3QMG8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13d-3J3QMG8 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13d-3J3QMG8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13d-3J3QMG8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13d-3J3QMG8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13d-3J3QMG8 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav13d-3J3QMG8 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms