Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc188F6WEU2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc188F6WEU2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc188F6WEU2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc188F6WEU2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.9■□□□□ 0.78
Ccdc188F6WEU2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc188F6WEU2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc188F6WEU2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc188F6WEU2 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.89■□□□□ 0.77
Ccdc188F6WEU2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc188F6WEU2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
Ccdc188F6WEU2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc188F6WEU2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.89■□□□□ 0.77
Ccdc188F6WEU2 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc188F6WEU2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc188F6WEU2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc188F6WEU2 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.89■□□□□ 0.77
Ccdc188F6WEU2 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc188F6WEU2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc188F6WEU2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.88■□□□□ 0.77
Ccdc188F6WEU2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc188F6WEU2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc188F6WEU2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc188F6WEU2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.88■□□□□ 0.77
Ccdc188F6WEU2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.88■□□□□ 0.77
Ccdc188F6WEU2 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ccdc188F6WEU2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ccdc188F6WEU2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc188F6WEU2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc188F6WEU2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ccdc188F6WEU2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.88■□□□□ 0.77
Ccdc188F6WEU2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc188F6WEU2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.87■□□□□ 0.77
Ccdc188F6WEU2 Gm2399-201ENSMUST00000104944 225 ntBASIC19.87■□□□□ 0.77
Ccdc188F6WEU2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.87■□□□□ 0.77
Ccdc188F6WEU2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc188F6WEU2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.87■□□□□ 0.77
Ccdc188F6WEU2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc188F6WEU2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ccdc188F6WEU2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc188F6WEU2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc188F6WEU2 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.86■□□□□ 0.77
Ccdc188F6WEU2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.86■□□□□ 0.77
Ccdc188F6WEU2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc188F6WEU2 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc188F6WEU2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc188F6WEU2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc188F6WEU2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc188F6WEU2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.85■□□□□ 0.77
Ccdc188F6WEU2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.85■□□□□ 0.77
Ccdc188F6WEU2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC19.85■□□□□ 0.77
Ccdc188F6WEU2 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc188F6WEU2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc188F6WEU2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Ccdc188F6WEU2 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.84■□□□□ 0.77
Ccdc188F6WEU2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.84■□□□□ 0.77
Ccdc188F6WEU2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc188F6WEU2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc188F6WEU2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc188F6WEU2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.84■□□□□ 0.77
Ccdc188F6WEU2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc188F6WEU2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc188F6WEU2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Ccdc188F6WEU2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc188F6WEU2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc188F6WEU2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc188F6WEU2 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc188F6WEU2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.84■□□□□ 0.77
Ccdc188F6WEU2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc188F6WEU2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
Ccdc188F6WEU2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc188F6WEU2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc188F6WEU2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
Ccdc188F6WEU2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc188F6WEU2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Ccdc188F6WEU2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
Ccdc188F6WEU2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.83■□□□□ 0.77
Ccdc188F6WEU2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc188F6WEU2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.83■□□□□ 0.77
Ccdc188F6WEU2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc188F6WEU2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc188F6WEU2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc188F6WEU2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc188F6WEU2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Ccdc188F6WEU2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc188F6WEU2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc188F6WEU2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc188F6WEU2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.81■□□□□ 0.76
Ccdc188F6WEU2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ccdc188F6WEU2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
Ccdc188F6WEU2 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Ccdc188F6WEU2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc188F6WEU2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc188F6WEU2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc188F6WEU2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc188F6WEU2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.8■□□□□ 0.76
Ccdc188F6WEU2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc188F6WEU2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc188F6WEU2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc188F6WEU2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms