Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Dchs1E9PVD3 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Dchs1E9PVD3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.37■□□□□ 0.37
Dchs1E9PVD3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Dchs1E9PVD3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dchs1E9PVD3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dchs1E9PVD3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Dchs1E9PVD3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.36■□□□□ 0.37
Dchs1E9PVD3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dchs1E9PVD3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dchs1E9PVD3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Dchs1E9PVD3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dchs1E9PVD3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Dchs1E9PVD3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Dchs1E9PVD3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dchs1E9PVD3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dchs1E9PVD3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Dchs1E9PVD3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Dchs1E9PVD3 Gm7290-201ENSMUST00000104990 617 ntBASIC17.35■□□□□ 0.37
Dchs1E9PVD3 Gm15565-201ENSMUST00000118890 427 ntBASIC17.35■□□□□ 0.37
Dchs1E9PVD3 Gm12918-201ENSMUST00000120234 636 ntBASIC17.35■□□□□ 0.37
Dchs1E9PVD3 Gm15710-201ENSMUST00000121821 636 ntBASIC17.35■□□□□ 0.37
Dchs1E9PVD3 Gm5075-201ENSMUST00000196916 622 ntBASIC17.35■□□□□ 0.37
Dchs1E9PVD3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dchs1E9PVD3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.35■□□□□ 0.37
Dchs1E9PVD3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.35■□□□□ 0.37
Dchs1E9PVD3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dchs1E9PVD3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dchs1E9PVD3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Dchs1E9PVD3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Dchs1E9PVD3 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Dchs1E9PVD3 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Dchs1E9PVD3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Dchs1E9PVD3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dchs1E9PVD3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Dchs1E9PVD3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Dchs1E9PVD3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Dchs1E9PVD3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
Dchs1E9PVD3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Dchs1E9PVD3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Dchs1E9PVD3 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Dchs1E9PVD3 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Dchs1E9PVD3 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.33■□□□□ 0.37
Dchs1E9PVD3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Dchs1E9PVD3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.33■□□□□ 0.37
Dchs1E9PVD3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Dchs1E9PVD3 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.33■□□□□ 0.36
Dchs1E9PVD3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.33■□□□□ 0.36
Dchs1E9PVD3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Dchs1E9PVD3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Dchs1E9PVD3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Dchs1E9PVD3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.32■□□□□ 0.36
Dchs1E9PVD3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Dchs1E9PVD3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Dchs1E9PVD3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Dchs1E9PVD3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Dchs1E9PVD3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.32■□□□□ 0.36
Dchs1E9PVD3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Dchs1E9PVD3 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Dchs1E9PVD3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Dchs1E9PVD3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Dchs1E9PVD3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Dchs1E9PVD3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Dchs1E9PVD3 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Dchs1E9PVD3 Gm27275-201ENSMUST00000184318 272 ntBASIC17.32■□□□□ 0.36
Dchs1E9PVD3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC17.32■□□□□ 0.36
Dchs1E9PVD3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dchs1E9PVD3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.31■□□□□ 0.36
Dchs1E9PVD3 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dchs1E9PVD3 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dchs1E9PVD3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dchs1E9PVD3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Dchs1E9PVD3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dchs1E9PVD3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Dchs1E9PVD3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dchs1E9PVD3 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Dchs1E9PVD3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dchs1E9PVD3 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Dchs1E9PVD3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Dchs1E9PVD3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Dchs1E9PVD3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Dchs1E9PVD3 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.3■□□□□ 0.36
Dchs1E9PVD3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Dchs1E9PVD3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.3■□□□□ 0.36
Dchs1E9PVD3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dchs1E9PVD3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dchs1E9PVD3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.3■□□□□ 0.36
Dchs1E9PVD3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Dchs1E9PVD3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Dchs1E9PVD3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dchs1E9PVD3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dchs1E9PVD3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dchs1E9PVD3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.29■□□□□ 0.36
Dchs1E9PVD3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Dchs1E9PVD3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dchs1E9PVD3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Dchs1E9PVD3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Dchs1E9PVD3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.28■□□□□ 0.36
Dchs1E9PVD3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.28■□□□□ 0.36
Dchs1E9PVD3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms