Protein–RNA interactions for Protein: D3YUM8

Gm4950, Proteasome subunit beta type, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4950D3YUM8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Gm4950D3YUM8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm4950D3YUM8 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm4950D3YUM8 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm4950D3YUM8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm4950D3YUM8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm4950D3YUM8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Gm4950D3YUM8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm4950D3YUM8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm4950D3YUM8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.54■□□□□ 0.24
Gm4950D3YUM8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Gm4950D3YUM8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.54■□□□□ 0.24
Gm4950D3YUM8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.54■□□□□ 0.24
Gm4950D3YUM8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Gm4950D3YUM8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.54■□□□□ 0.24
Gm4950D3YUM8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.54■□□□□ 0.24
Gm4950D3YUM8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Gm4950D3YUM8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm4950D3YUM8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Gm4950D3YUM8 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.54■□□□□ 0.24
Gm4950D3YUM8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm4950D3YUM8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm4950D3YUM8 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Gm4950D3YUM8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Gm4950D3YUM8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm4950D3YUM8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.54■□□□□ 0.24
Gm4950D3YUM8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Gm4950D3YUM8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm4950D3YUM8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Gm4950D3YUM8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Gm4950D3YUM8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gm4950D3YUM8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm4950D3YUM8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm4950D3YUM8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm4950D3YUM8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm4950D3YUM8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm4950D3YUM8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm4950D3YUM8 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
Gm4950D3YUM8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm4950D3YUM8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm4950D3YUM8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gm4950D3YUM8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm4950D3YUM8 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.53■□□□□ 0.24
Gm4950D3YUM8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm4950D3YUM8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Gm4950D3YUM8 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.53■□□□□ 0.24
Gm4950D3YUM8 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.53■□□□□ 0.24
Gm4950D3YUM8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.53■□□□□ 0.24
Gm4950D3YUM8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Gm4950D3YUM8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Gm4950D3YUM8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Gm4950D3YUM8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Gm4950D3YUM8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.52■□□□□ 0.24
Gm4950D3YUM8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Gm4950D3YUM8 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Gm4950D3YUM8 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.52■□□□□ 0.23
Gm4950D3YUM8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm4950D3YUM8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm4950D3YUM8 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Gm4950D3YUM8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm4950D3YUM8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm4950D3YUM8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm4950D3YUM8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm4950D3YUM8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm4950D3YUM8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Gm4950D3YUM8 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.51■□□□□ 0.23
Gm4950D3YUM8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm4950D3YUM8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm4950D3YUM8 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm4950D3YUM8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Gm4950D3YUM8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Gm4950D3YUM8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
Gm4950D3YUM8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm4950D3YUM8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Gm4950D3YUM8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm4950D3YUM8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.5■□□□□ 0.23
Gm4950D3YUM8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm4950D3YUM8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm4950D3YUM8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.5■□□□□ 0.23
Gm4950D3YUM8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.5■□□□□ 0.23
Gm4950D3YUM8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.5■□□□□ 0.23
Gm4950D3YUM8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm4950D3YUM8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm4950D3YUM8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm4950D3YUM8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm4950D3YUM8 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm4950D3YUM8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm4950D3YUM8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.5■□□□□ 0.23
Gm4950D3YUM8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Gm4950D3YUM8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm4950D3YUM8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.49■□□□□ 0.23
Gm4950D3YUM8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm4950D3YUM8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.49■□□□□ 0.23
Gm4950D3YUM8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm4950D3YUM8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.49■□□□□ 0.23
Gm4950D3YUM8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
Gm4950D3YUM8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Gm4950D3YUM8 Gm9847-201ENSMUST00000052528 599 ntBASIC16.49■□□□□ 0.23
Gm4950D3YUM8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.49■□□□□ 0.23
Gm4950D3YUM8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms