Protein–RNA interactions for Protein: B9EKX1

Ptchd4, Patched domain-containing protein 4, mousemouse

Predictions only

Length 904 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd4B9EKX1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ptchd4B9EKX1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ptchd4B9EKX1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ptchd4B9EKX1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ptchd4B9EKX1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ptchd4B9EKX1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ptchd4B9EKX1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ptchd4B9EKX1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ptchd4B9EKX1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ptchd4B9EKX1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ptchd4B9EKX1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Ptchd4B9EKX1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ptchd4B9EKX1 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.9■□□□□ 0.94
Ptchd4B9EKX1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ptchd4B9EKX1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.9■□□□□ 0.94
Ptchd4B9EKX1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Ptchd4B9EKX1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.9■□□□□ 0.94
Ptchd4B9EKX1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ptchd4B9EKX1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ptchd4B9EKX1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ptchd4B9EKX1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ptchd4B9EKX1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.89■□□□□ 0.93
Ptchd4B9EKX1 Gm6420-201ENSMUST00000193885 723 ntBASIC20.89■□□□□ 0.93
Ptchd4B9EKX1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Ptchd4B9EKX1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ptchd4B9EKX1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ptchd4B9EKX1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ptchd4B9EKX1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.89■□□□□ 0.93
Ptchd4B9EKX1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ptchd4B9EKX1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ptchd4B9EKX1 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ptchd4B9EKX1 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.88■□□□□ 0.93
Ptchd4B9EKX1 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ptchd4B9EKX1 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.88■□□□□ 0.93
Ptchd4B9EKX1 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ptchd4B9EKX1 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Ptchd4B9EKX1 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Ptchd4B9EKX1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ptchd4B9EKX1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.88■□□□□ 0.93
Ptchd4B9EKX1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ptchd4B9EKX1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ptchd4B9EKX1 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ptchd4B9EKX1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ptchd4B9EKX1 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ptchd4B9EKX1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ptchd4B9EKX1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ptchd4B9EKX1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ptchd4B9EKX1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ptchd4B9EKX1 Gm7860-201ENSMUST00000121190 879 ntBASIC20.87■□□□□ 0.93
Ptchd4B9EKX1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ptchd4B9EKX1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ptchd4B9EKX1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ptchd4B9EKX1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ptchd4B9EKX1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Ptchd4B9EKX1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Ptchd4B9EKX1 Gm12441-201ENSMUST00000121806 588 ntBASIC20.86■□□□□ 0.93
Ptchd4B9EKX1 Nespas-201ENSMUST00000143738 1083 ntBASIC20.86■□□□□ 0.93
Ptchd4B9EKX1 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ptchd4B9EKX1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ptchd4B9EKX1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ptchd4B9EKX1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ptchd4B9EKX1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ptchd4B9EKX1 Gm7290-201ENSMUST00000104990 617 ntBASIC20.85■□□□□ 0.93
Ptchd4B9EKX1 Gm13148-201ENSMUST00000118892 745 ntBASIC20.85■□□□□ 0.93
Ptchd4B9EKX1 Gm12918-201ENSMUST00000120234 636 ntBASIC20.85■□□□□ 0.93
Ptchd4B9EKX1 Gm15710-201ENSMUST00000121821 636 ntBASIC20.85■□□□□ 0.93
Ptchd4B9EKX1 Gm5075-201ENSMUST00000196916 622 ntBASIC20.85■□□□□ 0.93
Ptchd4B9EKX1 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.85■□□□□ 0.93
Ptchd4B9EKX1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.85■□□□□ 0.93
Ptchd4B9EKX1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.85■□□□□ 0.93
Ptchd4B9EKX1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.85■□□□□ 0.93
Ptchd4B9EKX1 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ptchd4B9EKX1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ptchd4B9EKX1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ptchd4B9EKX1 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ptchd4B9EKX1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ptchd4B9EKX1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ptchd4B9EKX1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ptchd4B9EKX1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ptchd4B9EKX1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ptchd4B9EKX1 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.84■□□□□ 0.93
Ptchd4B9EKX1 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.84■□□□□ 0.93
Ptchd4B9EKX1 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Ptchd4B9EKX1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ptchd4B9EKX1 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.84■□□□□ 0.93
Ptchd4B9EKX1 Gm6365-201ENSMUST00000054711 744 ntBASIC20.84■□□□□ 0.93
Ptchd4B9EKX1 Gm4968-201ENSMUST00000071458 858 ntBASIC20.84■□□□□ 0.93
Ptchd4B9EKX1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ptchd4B9EKX1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ptchd4B9EKX1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ptchd4B9EKX1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.84■□□□□ 0.93
Ptchd4B9EKX1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ptchd4B9EKX1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ptchd4B9EKX1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.83■□□□□ 0.93
Ptchd4B9EKX1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ptchd4B9EKX1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.83■□□□□ 0.93
Ptchd4B9EKX1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.83■□□□□ 0.93
Ptchd4B9EKX1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Ptchd4B9EKX1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.83■□□□□ 0.92
Ptchd4B9EKX1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms