Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.32■□□□□ 0.68
MBD3L4A6NDZ8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.32■□□□□ 0.68
MBD3L4A6NDZ8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.32■□□□□ 0.68
MBD3L4A6NDZ8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3L4A6NDZ8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3L4A6NDZ8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.32■□□□□ 0.68
MBD3L4A6NDZ8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.32■□□□□ 0.68
MBD3L4A6NDZ8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MBD3L4A6NDZ8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3L4A6NDZ8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3L4A6NDZ8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3L4A6NDZ8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.31■□□□□ 0.68
MBD3L4A6NDZ8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
MBD3L4A6NDZ8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.31■□□□□ 0.68
MBD3L4A6NDZ8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.31■□□□□ 0.68
MBD3L4A6NDZ8 KRT18P61-201ENST00000585825 1298 ntBASIC19.31■□□□□ 0.68
MBD3L4A6NDZ8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.31■□□□□ 0.68
MBD3L4A6NDZ8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.31■□□□□ 0.68
MBD3L4A6NDZ8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
MBD3L4A6NDZ8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3L4A6NDZ8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
MBD3L4A6NDZ8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3L4A6NDZ8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3L4A6NDZ8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3L4A6NDZ8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MBD3L4A6NDZ8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3L4A6NDZ8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3L4A6NDZ8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3L4A6NDZ8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3L4A6NDZ8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3L4A6NDZ8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.3■□□□□ 0.68
MBD3L4A6NDZ8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3L4A6NDZ8 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.3■□□□□ 0.68
MBD3L4A6NDZ8 AC004911.1-201ENST00000416316 871 ntBASIC19.3■□□□□ 0.68
MBD3L4A6NDZ8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.3■□□□□ 0.68
MBD3L4A6NDZ8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
MBD3L4A6NDZ8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.3■□□□□ 0.68
MBD3L4A6NDZ8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.3■□□□□ 0.68
MBD3L4A6NDZ8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3L4A6NDZ8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
MBD3L4A6NDZ8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
MBD3L4A6NDZ8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
MBD3L4A6NDZ8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MBD3L4A6NDZ8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.3■□□□□ 0.68
MBD3L4A6NDZ8 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3L4A6NDZ8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.29■□□□□ 0.68
MBD3L4A6NDZ8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3L4A6NDZ8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.29■□□□□ 0.68
MBD3L4A6NDZ8 AP004607.4-201ENST00000530158 1459 ntBASIC19.29■□□□□ 0.68
MBD3L4A6NDZ8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3L4A6NDZ8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3L4A6NDZ8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3L4A6NDZ8 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.29■□□□□ 0.68
MBD3L4A6NDZ8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.29■□□□□ 0.68
MBD3L4A6NDZ8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.29■□□□□ 0.68
MBD3L4A6NDZ8 AC090192.1-201ENST00000517740 490 ntBASIC19.29■□□□□ 0.68
MBD3L4A6NDZ8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
MBD3L4A6NDZ8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3L4A6NDZ8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
MBD3L4A6NDZ8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MBD3L4A6NDZ8 LINC01960-201ENST00000563759 1884 ntBASIC19.28■□□□□ 0.68
MBD3L4A6NDZ8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
MBD3L4A6NDZ8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.28■□□□□ 0.68
MBD3L4A6NDZ8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.28■□□□□ 0.68
MBD3L4A6NDZ8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.28■□□□□ 0.68
MBD3L4A6NDZ8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.28■□□□□ 0.68
MBD3L4A6NDZ8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3L4A6NDZ8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
MBD3L4A6NDZ8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MBD3L4A6NDZ8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.27■□□□□ 0.68
MBD3L4A6NDZ8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3L4A6NDZ8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3L4A6NDZ8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
MBD3L4A6NDZ8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3L4A6NDZ8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.27■□□□□ 0.68
MBD3L4A6NDZ8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.27■□□□□ 0.68
MBD3L4A6NDZ8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.27■□□□□ 0.68
MBD3L4A6NDZ8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
MBD3L4A6NDZ8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MBD3L4A6NDZ8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MBD3L4A6NDZ8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
MBD3L4A6NDZ8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MBD3L4A6NDZ8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MBD3L4A6NDZ8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MBD3L4A6NDZ8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3L4A6NDZ8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
MBD3L4A6NDZ8 AC009237.3-201ENST00000393279 1427 ntBASIC19.26■□□□□ 0.67
MBD3L4A6NDZ8 AC004854.2-201ENST00000608450 1441 ntBASIC19.26■□□□□ 0.67
MBD3L4A6NDZ8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3L4A6NDZ8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3L4A6NDZ8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.26■□□□□ 0.67
MBD3L4A6NDZ8 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3L4A6NDZ8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
MBD3L4A6NDZ8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
MBD3L4A6NDZ8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD3L4A6NDZ8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3L4A6NDZ8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3L4A6NDZ8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3L4A6NDZ8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3L4A6NDZ8 AC005224.4-201ENST00000583262 1652 ntBASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms