Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a5A6H584 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col6a5A6H584 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Col6a5A6H584 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Col6a5A6H584 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a5A6H584 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.86□□□□□ -0.03
Col6a5A6H584 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.86□□□□□ -0.03
Col6a5A6H584 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a5A6H584 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a5A6H584 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a5A6H584 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col6a5A6H584 Gm17971-201ENSMUST00000190239 806 ntBASIC14.85□□□□□ -0.03
Col6a5A6H584 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a5A6H584 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a5A6H584 Gm18666-201ENSMUST00000190039 958 ntBASIC14.85□□□□□ -0.03
Col6a5A6H584 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a5A6H584 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Col6a5A6H584 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a5A6H584 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col6a5A6H584 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a5A6H584 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Col6a5A6H584 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a5A6H584 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.84□□□□□ -0.03
Col6a5A6H584 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a5A6H584 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Col6a5A6H584 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Col6a5A6H584 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a5A6H584 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a5A6H584 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.84□□□□□ -0.03
Col6a5A6H584 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a5A6H584 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Col6a5A6H584 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.84□□□□□ -0.03
Col6a5A6H584 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Col6a5A6H584 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a5A6H584 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a5A6H584 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a5A6H584 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a5A6H584 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a5A6H584 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a5A6H584 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Col6a5A6H584 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a5A6H584 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a5A6H584 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.83□□□□□ -0.03
Col6a5A6H584 Gm44771-201ENSMUST00000206975 626 ntBASIC14.83□□□□□ -0.03
Col6a5A6H584 Gm5867-201ENSMUST00000063197 592 ntBASIC14.83□□□□□ -0.03
Col6a5A6H584 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a5A6H584 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Col6a5A6H584 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a5A6H584 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a5A6H584 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a5A6H584 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a5A6H584 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a5A6H584 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.83□□□□□ -0.04
Col6a5A6H584 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Col6a5A6H584 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Col6a5A6H584 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a5A6H584 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.82□□□□□ -0.04
Col6a5A6H584 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a5A6H584 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a5A6H584 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Col6a5A6H584 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a5A6H584 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a5A6H584 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Col6a5A6H584 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Col6a5A6H584 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a5A6H584 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a5A6H584 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a5A6H584 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.82□□□□□ -0.04
Col6a5A6H584 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.82□□□□□ -0.04
Col6a5A6H584 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.82□□□□□ -0.04
Col6a5A6H584 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a5A6H584 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Col6a5A6H584 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Col6a5A6H584 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.82□□□□□ -0.04
Col6a5A6H584 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a5A6H584 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a5A6H584 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a5A6H584 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a5A6H584 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Col6a5A6H584 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a5A6H584 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a5A6H584 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a5A6H584 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a5A6H584 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a5A6H584 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a5A6H584 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Col6a5A6H584 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a5A6H584 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a5A6H584 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a5A6H584 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a5A6H584 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a5A6H584 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a5A6H584 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Col6a5A6H584 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a5A6H584 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col6a5A6H584 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.8□□□□□ -0.04
Col6a5A6H584 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Col6a5A6H584 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Col6a5A6H584 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Col6a5A6H584 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms