Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ubr4A2AN08 H2-K2-201ENSMUST00000174250 1049 ntBASIC10.44□□□□□ -0.74
Ubr4A2AN08 AC154471.1-201ENSMUST00000224418 436 ntBASIC10.44□□□□□ -0.74
Ubr4A2AN08 Gm2559-201ENSMUST00000201323 363 ntBASIC10.44□□□□□ -0.74
Ubr4A2AN08 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ubr4A2AN08 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Ubr4A2AN08 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ubr4A2AN08 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ubr4A2AN08 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ubr4A2AN08 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC10.44□□□□□ -0.74
Ubr4A2AN08 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ubr4A2AN08 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ubr4A2AN08 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ubr4A2AN08 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ubr4A2AN08 Gm10571-201ENSMUST00000097869 1638 ntBASIC10.44□□□□□ -0.74
Ubr4A2AN08 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ubr4A2AN08 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ubr4A2AN08 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ubr4A2AN08 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Ubr4A2AN08 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ubr4A2AN08 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ubr4A2AN08 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ubr4A2AN08 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ubr4A2AN08 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ubr4A2AN08 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ubr4A2AN08 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ubr4A2AN08 Gm5712-201ENSMUST00000199748 1043 ntBASIC10.43□□□□□ -0.74
Ubr4A2AN08 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Ubr4A2AN08 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Ubr4A2AN08 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ubr4A2AN08 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ubr4A2AN08 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.43□□□□□ -0.74
Ubr4A2AN08 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ubr4A2AN08 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Ubr4A2AN08 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ubr4A2AN08 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ubr4A2AN08 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC10.43□□□□□ -0.74
Ubr4A2AN08 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Ubr4A2AN08 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC10.42□□□□□ -0.74
Ubr4A2AN08 Arhgef4-208ENSMUST00000211073 171 ntBASIC10.42□□□□□ -0.74
Ubr4A2AN08 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC10.42□□□□□ -0.74
Ubr4A2AN08 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ubr4A2AN08 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ubr4A2AN08 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ubr4A2AN08 Gm30025-201ENSMUST00000218555 728 ntBASIC10.42□□□□□ -0.74
Ubr4A2AN08 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ubr4A2AN08 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ubr4A2AN08 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ubr4A2AN08 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ubr4A2AN08 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ubr4A2AN08 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ubr4A2AN08 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ubr4A2AN08 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Ubr4A2AN08 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ubr4A2AN08 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC10.41□□□□□ -0.74
Ubr4A2AN08 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ubr4A2AN08 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ubr4A2AN08 Gm43073-201ENSMUST00000198200 1189 ntBASIC10.41□□□□□ -0.74
Ubr4A2AN08 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ubr4A2AN08 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC10.41□□□□□ -0.74
Ubr4A2AN08 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC10.41□□□□□ -0.74
Ubr4A2AN08 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC10.41□□□□□ -0.74
Ubr4A2AN08 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ubr4A2AN08 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ubr4A2AN08 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ubr4A2AN08 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC10.41□□□□□ -0.74
Ubr4A2AN08 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Ubr4A2AN08 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ubr4A2AN08 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ubr4A2AN08 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ubr4A2AN08 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ubr4A2AN08 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ubr4A2AN08 Gm21596-201ENSMUST00000178049 1316 ntBASIC10.41□□□□□ -0.74
Ubr4A2AN08 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ubr4A2AN08 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ubr4A2AN08 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ubr4A2AN08 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ubr4A2AN08 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC10.4□□□□□ -0.74
Ubr4A2AN08 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Ubr4A2AN08 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Ubr4A2AN08 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ubr4A2AN08 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ubr4A2AN08 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC10.4□□□□□ -0.75
Ubr4A2AN08 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ubr4A2AN08 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ubr4A2AN08 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Ubr4A2AN08 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Ubr4A2AN08 Umpk-ps-201ENSMUST00000211897 827 ntBASIC10.39□□□□□ -0.75
Ubr4A2AN08 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ubr4A2AN08 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ubr4A2AN08 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ubr4A2AN08 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC10.39□□□□□ -0.75
Ubr4A2AN08 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ubr4A2AN08 Gm15847-201ENSMUST00000121417 1065 ntBASIC10.39□□□□□ -0.75
Ubr4A2AN08 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ubr4A2AN08 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ubr4A2AN08 Gm7284-201ENSMUST00000131667 944 ntBASIC10.39□□□□□ -0.75
Ubr4A2AN08 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ubr4A2AN08 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ubr4A2AN08 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms