Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Cfap99A0A140LIX9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC23.16■■□□□ 1.3
Cfap99A0A140LIX9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Cfap99A0A140LIX9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cfap99A0A140LIX9 Gm10602-201ENSMUST00000098239 609 ntBASIC23.16■■□□□ 1.3
Cfap99A0A140LIX9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cfap99A0A140LIX9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cfap99A0A140LIX9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cfap99A0A140LIX9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cfap99A0A140LIX9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cfap99A0A140LIX9 Gm9988-201ENSMUST00000069786 435 ntBASIC23.15■■□□□ 1.3
Cfap99A0A140LIX9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cfap99A0A140LIX9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cfap99A0A140LIX9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cfap99A0A140LIX9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cfap99A0A140LIX9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Cfap99A0A140LIX9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Cfap99A0A140LIX9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
Cfap99A0A140LIX9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cfap99A0A140LIX9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Cfap99A0A140LIX9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cfap99A0A140LIX9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Cfap99A0A140LIX9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Cfap99A0A140LIX9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Cfap99A0A140LIX9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cfap99A0A140LIX9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cfap99A0A140LIX9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC23.13■■□□□ 1.29
Cfap99A0A140LIX9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cfap99A0A140LIX9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cfap99A0A140LIX9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cfap99A0A140LIX9 Mir6236-201ENSMUST00000184437 123 ntBASIC23.13■■□□□ 1.29
Cfap99A0A140LIX9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cfap99A0A140LIX9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC23.13■■□□□ 1.29
Cfap99A0A140LIX9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cfap99A0A140LIX9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cfap99A0A140LIX9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cfap99A0A140LIX9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cfap99A0A140LIX9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Cfap99A0A140LIX9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Cfap99A0A140LIX9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC23.12■■□□□ 1.29
Cfap99A0A140LIX9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cfap99A0A140LIX9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cfap99A0A140LIX9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Cfap99A0A140LIX9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Cfap99A0A140LIX9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Cfap99A0A140LIX9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cfap99A0A140LIX9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Cfap99A0A140LIX9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Cfap99A0A140LIX9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC23.11■■□□□ 1.29
Cfap99A0A140LIX9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cfap99A0A140LIX9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cfap99A0A140LIX9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC23.11■■□□□ 1.29
Cfap99A0A140LIX9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC23.11■■□□□ 1.29
Cfap99A0A140LIX9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC23.11■■□□□ 1.29
Cfap99A0A140LIX9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cfap99A0A140LIX9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cfap99A0A140LIX9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cfap99A0A140LIX9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cfap99A0A140LIX9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cfap99A0A140LIX9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cfap99A0A140LIX9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cfap99A0A140LIX9 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cfap99A0A140LIX9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC23.1■■□□□ 1.29
Cfap99A0A140LIX9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC23.1■■□□□ 1.29
Cfap99A0A140LIX9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Cfap99A0A140LIX9 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC23.1■■□□□ 1.29
Cfap99A0A140LIX9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC23.1■■□□□ 1.29
Cfap99A0A140LIX9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cfap99A0A140LIX9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cfap99A0A140LIX9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cfap99A0A140LIX9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cfap99A0A140LIX9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cfap99A0A140LIX9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Cfap99A0A140LIX9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cfap99A0A140LIX9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cfap99A0A140LIX9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cfap99A0A140LIX9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC23.09■■□□□ 1.29
Cfap99A0A140LIX9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cfap99A0A140LIX9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Cfap99A0A140LIX9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cfap99A0A140LIX9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Cfap99A0A140LIX9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cfap99A0A140LIX9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cfap99A0A140LIX9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cfap99A0A140LIX9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cfap99A0A140LIX9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cfap99A0A140LIX9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Cfap99A0A140LIX9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Cfap99A0A140LIX9 Gm12933-201ENSMUST00000120203 872 ntBASIC23.08■■□□□ 1.29
Cfap99A0A140LIX9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cfap99A0A140LIX9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Cfap99A0A140LIX9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.29
Cfap99A0A140LIX9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Cfap99A0A140LIX9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Cfap99A0A140LIX9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Cfap99A0A140LIX9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cfap99A0A140LIX9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cfap99A0A140LIX9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cfap99A0A140LIX9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cfap99A0A140LIX9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms