Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv29A0A0G2LB96 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trbv29A0A0G2LB96 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Trbv29A0A0G2LB96 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv29A0A0G2LB96 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv29A0A0G2LB96 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv29A0A0G2LB96 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv29A0A0G2LB96 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Trbv29A0A0G2LB96 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv29A0A0G2LB96 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv29A0A0G2LB96 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.06■□□□□ 0.16
Trbv29A0A0G2LB96 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv29A0A0G2LB96 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv29A0A0G2LB96 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv29A0A0G2LB96 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv29A0A0G2LB96 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv29A0A0G2LB96 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv29A0A0G2LB96 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv29A0A0G2LB96 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.06■□□□□ 0.16
Trbv29A0A0G2LB96 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.06■□□□□ 0.16
Trbv29A0A0G2LB96 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trbv29A0A0G2LB96 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trbv29A0A0G2LB96 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trbv29A0A0G2LB96 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv29A0A0G2LB96 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.06■□□□□ 0.16
Trbv29A0A0G2LB96 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
Trbv29A0A0G2LB96 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv29A0A0G2LB96 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv29A0A0G2LB96 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv29A0A0G2LB96 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv29A0A0G2LB96 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv29A0A0G2LB96 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv29A0A0G2LB96 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trbv29A0A0G2LB96 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trbv29A0A0G2LB96 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.05■□□□□ 0.16
Trbv29A0A0G2LB96 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trbv29A0A0G2LB96 Gm5522-201ENSMUST00000189483 1242 ntBASIC16.05■□□□□ 0.16
Trbv29A0A0G2LB96 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
Trbv29A0A0G2LB96 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv29A0A0G2LB96 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv29A0A0G2LB96 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.05■□□□□ 0.16
Trbv29A0A0G2LB96 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv29A0A0G2LB96 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv29A0A0G2LB96 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv29A0A0G2LB96 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv29A0A0G2LB96 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv29A0A0G2LB96 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv29A0A0G2LB96 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trbv29A0A0G2LB96 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv29A0A0G2LB96 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.04■□□□□ 0.16
Trbv29A0A0G2LB96 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv29A0A0G2LB96 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv29A0A0G2LB96 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv29A0A0G2LB96 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv29A0A0G2LB96 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv29A0A0G2LB96 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trbv29A0A0G2LB96 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trbv29A0A0G2LB96 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv29A0A0G2LB96 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv29A0A0G2LB96 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv29A0A0G2LB96 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Trbv29A0A0G2LB96 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv29A0A0G2LB96 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv29A0A0G2LB96 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv29A0A0G2LB96 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv29A0A0G2LB96 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv29A0A0G2LB96 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.03■□□□□ 0.16
Trbv29A0A0G2LB96 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv29A0A0G2LB96 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv29A0A0G2LB96 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv29A0A0G2LB96 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.03■□□□□ 0.16
Trbv29A0A0G2LB96 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv29A0A0G2LB96 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv29A0A0G2LB96 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv29A0A0G2LB96 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv29A0A0G2LB96 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trbv29A0A0G2LB96 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv29A0A0G2LB96 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv29A0A0G2LB96 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.02■□□□□ 0.16
Trbv29A0A0G2LB96 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Trbv29A0A0G2LB96 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.02■□□□□ 0.16
Trbv29A0A0G2LB96 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv29A0A0G2LB96 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv29A0A0G2LB96 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv29A0A0G2LB96 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv29A0A0G2LB96 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv29A0A0G2LB96 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv29A0A0G2LB96 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv29A0A0G2LB96 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv29A0A0G2LB96 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv29A0A0G2LB96 AC154266.1-201ENSMUST00000223190 503 ntBASIC16.01■□□□□ 0.15
Trbv29A0A0G2LB96 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv29A0A0G2LB96 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv29A0A0G2LB96 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv29A0A0G2LB96 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv29A0A0G2LB96 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.01■□□□□ 0.15
Trbv29A0A0G2LB96 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv29A0A0G2LB96 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv29A0A0G2LB96 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trbv29A0A0G2LB96 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms