Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.98■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Golgb1-201ENSMUST00000023534 498 ntBASIC16.98■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Golph3-205ENSMUST00000228671 2842 ntBASIC16.98■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.98■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.97■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.96■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.96■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.96■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC16.96■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.96■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav15d-2-dv6d-2A0A0G2JGQ7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12922-201ENSMUST00000120626 809 ntBASIC16.95■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.95■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.94■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.94■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.94■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Serp2-204ENSMUST00000228055 705 ntBASIC16.94■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.93■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.92■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.91■□□□□ 0.3
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms