Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9d-4A0A0G2JG37 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9d-4A0A0G2JG37 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9d-4A0A0G2JG37 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9d-4A0A0G2JG37 Gm5784-201ENSMUST00000179344 2478 ntBASIC13.27□□□□□ -0.29
Trav9d-4A0A0G2JG37 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9d-4A0A0G2JG37 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Trav9d-4A0A0G2JG37 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav9d-4A0A0G2JG37 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav9d-4A0A0G2JG37 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9d-4A0A0G2JG37 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9d-4A0A0G2JG37 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav9d-4A0A0G2JG37 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9d-4A0A0G2JG37 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9d-4A0A0G2JG37 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav9d-4A0A0G2JG37 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9d-4A0A0G2JG37 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9d-4A0A0G2JG37 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9d-4A0A0G2JG37 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9d-4A0A0G2JG37 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9d-4A0A0G2JG37 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9d-4A0A0G2JG37 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9d-4A0A0G2JG37 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9d-4A0A0G2JG37 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9d-4A0A0G2JG37 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav9d-4A0A0G2JG37 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 Gm6802-201ENSMUST00000167843 1983 ntBASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 Gm5067-201ENSMUST00000170449 1009 ntBASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav9d-4A0A0G2JG37 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9d-4A0A0G2JG37 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9d-4A0A0G2JG37 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Trav9d-4A0A0G2JG37 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9d-4A0A0G2JG37 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9d-4A0A0G2JG37 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9d-4A0A0G2JG37 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9d-4A0A0G2JG37 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9d-4A0A0G2JG37 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9d-4A0A0G2JG37 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9d-4A0A0G2JG37 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9d-4A0A0G2JG37 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9d-4A0A0G2JG37 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav9d-4A0A0G2JG37 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9d-4A0A0G2JG37 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9d-4A0A0G2JG37 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9d-4A0A0G2JG37 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9d-4A0A0G2JG37 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9d-4A0A0G2JG37 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9d-4A0A0G2JG37 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav9d-4A0A0G2JG37 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9d-4A0A0G2JG37 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9d-4A0A0G2JG37 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9d-4A0A0G2JG37 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9d-4A0A0G2JG37 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9d-4A0A0G2JG37 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9d-4A0A0G2JG37 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Trav9d-4A0A0G2JG37 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9d-4A0A0G2JG37 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav9d-4A0A0G2JG37 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9d-4A0A0G2JG37 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9d-4A0A0G2JG37 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9d-4A0A0G2JG37 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9d-4A0A0G2JG37 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav9d-4A0A0G2JG37 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav9d-4A0A0G2JG37 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-4A0A0G2JG37 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.22□□□□□ -0.29
Trav9d-4A0A0G2JG37 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-4A0A0G2JG37 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-4A0A0G2JG37 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-4A0A0G2JG37 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-4A0A0G2JG37 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-4A0A0G2JG37 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trav9d-4A0A0G2JG37 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-4A0A0G2JG37 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trav9d-4A0A0G2JG37 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav9d-4A0A0G2JG37 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-4A0A0G2JG37 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-4A0A0G2JG37 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-4A0A0G2JG37 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-4A0A0G2JG37 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav9d-4A0A0G2JG37 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav9d-4A0A0G2JG37 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms