Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-4A0A0G2JFX3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-4A0A0G2JFX3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-4A0A0G2JFX3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-4A0A0G2JFX3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC13.3□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Gm18755-201ENSMUST00000218030 1099 ntBASIC13.29□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-4A0A0G2JFX3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Gm5112-201ENSMUST00000204407 2368 ntBASIC13.28□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Trav13d-4A0A0G2JFX3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav13d-4A0A0G2JFX3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.27□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Gm15820-201ENSMUST00000201566 728 ntBASIC13.27□□□□□ -0.29
Trav13d-4A0A0G2JFX3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC13.27□□□□□ -0.29
Trav13d-4A0A0G2JFX3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms