Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Smad6-203ENSMUST00000179458 273 ntBASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav13n-1A0A0G2JEU8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Gm5874-201ENSMUST00000096101 508 ntBASIC13.96□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Trav13n-1A0A0G2JEU8 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-1A0A0G2JEU8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC13.95□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-1A0A0G2JEU8 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Gm11421-201ENSMUST00000122124 294 ntBASIC13.95□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-1A0A0G2JEU8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.95□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Trav13n-1A0A0G2JEU8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms