Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC14.07□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Gm13241-201ENSMUST00000094493 780 ntBASIC14.07□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.07□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9n-2A0A0G2JDP3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.06□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.06□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav9n-2A0A0G2JDP3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC14.06□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Gm21956-201ENSMUST00000179946 522 ntBASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Gm43137-201ENSMUST00000198052 594 ntBASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Iqck-206ENSMUST00000208658 2891 ntBASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9n-2A0A0G2JDP3 AA386476-201ENSMUST00000098781 1665 ntBASIC14.04□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.04□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9n-2A0A0G2JDP3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9n-2A0A0G2JDP3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9n-2A0A0G2JDP3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.03□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav9n-2A0A0G2JDP3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.03□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav9n-2A0A0G2JDP3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9n-2A0A0G2JDP3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.02□□□□□ -0.17
Trav9n-2A0A0G2JDP3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.02□□□□□ -0.17
Trav9n-2A0A0G2JDP3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9n-2A0A0G2JDP3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trav9n-2A0A0G2JDP3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav9n-2A0A0G2JDP3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms