Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav19A0A0B4J1K4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav19A0A0B4J1K4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav19A0A0B4J1K4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav19A0A0B4J1K4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav19A0A0B4J1K4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav19A0A0B4J1K4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav19A0A0B4J1K4 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.47□□□□□ -0.09
Trav19A0A0B4J1K4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav19A0A0B4J1K4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav19A0A0B4J1K4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav19A0A0B4J1K4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav19A0A0B4J1K4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav19A0A0B4J1K4 Golph3-205ENSMUST00000228671 2842 ntBASIC14.47□□□□□ -0.09
Trav19A0A0B4J1K4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav19A0A0B4J1K4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Trav19A0A0B4J1K4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav19A0A0B4J1K4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav19A0A0B4J1K4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav19A0A0B4J1K4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav19A0A0B4J1K4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav19A0A0B4J1K4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav19A0A0B4J1K4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav19A0A0B4J1K4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav19A0A0B4J1K4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav19A0A0B4J1K4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav19A0A0B4J1K4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC14.46□□□□□ -0.09
Trav19A0A0B4J1K4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav19A0A0B4J1K4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav19A0A0B4J1K4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav19A0A0B4J1K4 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav19A0A0B4J1K4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav19A0A0B4J1K4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav19A0A0B4J1K4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav19A0A0B4J1K4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav19A0A0B4J1K4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav19A0A0B4J1K4 Cap2-205ENSMUST00000225824 1634 ntBASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Trav19A0A0B4J1K4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav19A0A0B4J1K4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav19A0A0B4J1K4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav19A0A0B4J1K4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav19A0A0B4J1K4 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav19A0A0B4J1K4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav19A0A0B4J1K4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav19A0A0B4J1K4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav19A0A0B4J1K4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.43□□□□□ -0.1
Trav19A0A0B4J1K4 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav19A0A0B4J1K4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav19A0A0B4J1K4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.43□□□□□ -0.1
Trav19A0A0B4J1K4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav19A0A0B4J1K4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav19A0A0B4J1K4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trav19A0A0B4J1K4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav19A0A0B4J1K4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms