Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trbv5A0A0B4J1G9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv5A0A0B4J1G9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv5A0A0B4J1G9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv5A0A0B4J1G9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv5A0A0B4J1G9 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trbv5A0A0B4J1G9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv5A0A0B4J1G9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv5A0A0B4J1G9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trbv5A0A0B4J1G9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv5A0A0B4J1G9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv5A0A0B4J1G9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trbv5A0A0B4J1G9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv5A0A0B4J1G9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.56■□□□□ 0.08
Trbv5A0A0B4J1G9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv5A0A0B4J1G9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv5A0A0B4J1G9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv5A0A0B4J1G9 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv5A0A0B4J1G9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.56■□□□□ 0.08
Trbv5A0A0B4J1G9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Trbv5A0A0B4J1G9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv5A0A0B4J1G9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv5A0A0B4J1G9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trbv5A0A0B4J1G9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trbv5A0A0B4J1G9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 BC021767-201ENSMUST00000126387 1716 ntBASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trbv5A0A0B4J1G9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trbv5A0A0B4J1G9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv5A0A0B4J1G9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.54■□□□□ 0.08
Trbv5A0A0B4J1G9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv5A0A0B4J1G9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trbv5A0A0B4J1G9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.54■□□□□ 0.08
Trbv5A0A0B4J1G9 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.54■□□□□ 0.08
Trbv5A0A0B4J1G9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv5A0A0B4J1G9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv5A0A0B4J1G9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv5A0A0B4J1G9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.54■□□□□ 0.08
Trbv5A0A0B4J1G9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv5A0A0B4J1G9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv5A0A0B4J1G9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv5A0A0B4J1G9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv5A0A0B4J1G9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv5A0A0B4J1G9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv5A0A0B4J1G9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trbv5A0A0B4J1G9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv5A0A0B4J1G9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv5A0A0B4J1G9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.53■□□□□ 0.08
Trbv5A0A0B4J1G9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv5A0A0B4J1G9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv5A0A0B4J1G9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.53■□□□□ 0.08
Trbv5A0A0B4J1G9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv5A0A0B4J1G9 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv5A0A0B4J1G9 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv5A0A0B4J1G9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv5A0A0B4J1G9 Gm27502-201ENSMUST00000183495 199 ntBASIC15.53■□□□□ 0.08
Trbv5A0A0B4J1G9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv5A0A0B4J1G9 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv5A0A0B4J1G9 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.53■□□□□ 0.08
Trbv5A0A0B4J1G9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trbv5A0A0B4J1G9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv5A0A0B4J1G9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.53■□□□□ 0.08
Trbv5A0A0B4J1G9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trbv5A0A0B4J1G9 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trbv5A0A0B4J1G9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv5A0A0B4J1G9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv5A0A0B4J1G9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv5A0A0B4J1G9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv5A0A0B4J1G9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv5A0A0B4J1G9 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv5A0A0B4J1G9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trbv5A0A0B4J1G9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Trbv5A0A0B4J1G9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv5A0A0B4J1G9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trbv5A0A0B4J1G9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.52■□□□□ 0.08
Trbv5A0A0B4J1G9 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.52■□□□□ 0.07
Trbv5A0A0B4J1G9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv5A0A0B4J1G9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv5A0A0B4J1G9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv5A0A0B4J1G9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trbv5A0A0B4J1G9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms