Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Trav13-4-dv7A0A075B6C2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Mir6236-201ENSMUST00000184437 123 ntBASIC13.32□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Gm40881-201ENSMUST00000223397 166 ntBASIC13.3□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC13.29□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trav13-4-dv7A0A075B6C2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms