Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-7A0A075B6B0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-7A0A075B6B0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-7A0A075B6B0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav6d-7A0A075B6B0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav6d-7A0A075B6B0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-7A0A075B6B0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-7A0A075B6B0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-7A0A075B6B0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-7A0A075B6B0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-7A0A075B6B0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6d-7A0A075B6B0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-7A0A075B6B0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-7A0A075B6B0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-7A0A075B6B0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-7A0A075B6B0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-7A0A075B6B0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav6d-7A0A075B6B0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-7A0A075B6B0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-7A0A075B6B0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-7A0A075B6B0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-7A0A075B6B0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-7A0A075B6B0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
Trav6d-7A0A075B6B0 Gm45417-201ENSMUST00000209533 758 ntBASIC14.89□□□□□ -0.03
Trav6d-7A0A075B6B0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-7A0A075B6B0 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-7A0A075B6B0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.89□□□□□ -0.03
Trav6d-7A0A075B6B0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-7A0A075B6B0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-7A0A075B6B0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Trav6d-7A0A075B6B0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6d-7A0A075B6B0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-7A0A075B6B0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-7A0A075B6B0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-7A0A075B6B0 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.88□□□□□ -0.03
Trav6d-7A0A075B6B0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-7A0A075B6B0 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.88□□□□□ -0.03
Trav6d-7A0A075B6B0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-7A0A075B6B0 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-7A0A075B6B0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-7A0A075B6B0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.88□□□□□ -0.03
Trav6d-7A0A075B6B0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-7A0A075B6B0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Trav6d-7A0A075B6B0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav6d-7A0A075B6B0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-7A0A075B6B0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6d-7A0A075B6B0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-7A0A075B6B0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav6d-7A0A075B6B0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-7A0A075B6B0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-7A0A075B6B0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-7A0A075B6B0 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-7A0A075B6B0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-7A0A075B6B0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-7A0A075B6B0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-7A0A075B6B0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-7A0A075B6B0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-7A0A075B6B0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav6d-7A0A075B6B0 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-7A0A075B6B0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-7A0A075B6B0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6d-7A0A075B6B0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6d-7A0A075B6B0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav6d-7A0A075B6B0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-7A0A075B6B0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-7A0A075B6B0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-7A0A075B6B0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-7A0A075B6B0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
Trav6d-7A0A075B6B0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-7A0A075B6B0 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav6d-7A0A075B6B0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.85□□□□□ -0.03
Trav6d-7A0A075B6B0 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.85□□□□□ -0.03
Trav6d-7A0A075B6B0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-7A0A075B6B0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-7A0A075B6B0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-7A0A075B6B0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6d-7A0A075B6B0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav6d-7A0A075B6B0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms