Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16A0A075B653 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16A0A075B653 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Trav16A0A075B653 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16A0A075B653 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16A0A075B653 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav16A0A075B653 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.93□□□□□ -0.02
Trav16A0A075B653 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16A0A075B653 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16A0A075B653 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16A0A075B653 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav16A0A075B653 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16A0A075B653 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Trav16A0A075B653 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16A0A075B653 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16A0A075B653 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC14.93□□□□□ -0.02
Trav16A0A075B653 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav16A0A075B653 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC14.93□□□□□ -0.02
Trav16A0A075B653 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16A0A075B653 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16A0A075B653 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16A0A075B653 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16A0A075B653 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16A0A075B653 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16A0A075B653 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Trav16A0A075B653 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16A0A075B653 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trav16A0A075B653 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav16A0A075B653 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav16A0A075B653 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16A0A075B653 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16A0A075B653 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Trav16A0A075B653 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16A0A075B653 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
Trav16A0A075B653 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
Trav16A0A075B653 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16A0A075B653 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav16A0A075B653 Gm45444-201ENSMUST00000211394 898 ntBASIC14.92□□□□□ -0.02
Trav16A0A075B653 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav16A0A075B653 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav16A0A075B653 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16A0A075B653 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16A0A075B653 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav16A0A075B653 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16A0A075B653 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav16A0A075B653 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16A0A075B653 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav16A0A075B653 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16A0A075B653 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav16A0A075B653 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16A0A075B653 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16A0A075B653 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav16A0A075B653 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16A0A075B653 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16A0A075B653 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16A0A075B653 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav16A0A075B653 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Trav16A0A075B653 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16A0A075B653 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC14.91□□□□□ -0.02
Trav16A0A075B653 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16A0A075B653 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16A0A075B653 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16A0A075B653 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav16A0A075B653 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav16A0A075B653 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav16A0A075B653 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav16A0A075B653 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16A0A075B653 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16A0A075B653 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16A0A075B653 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16A0A075B653 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16A0A075B653 Gm7143-201ENSMUST00000222811 859 ntBASIC14.9□□□□□ -0.02
Trav16A0A075B653 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16A0A075B653 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC14.9□□□□□ -0.02
Trav16A0A075B653 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16A0A075B653 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16A0A075B653 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav16A0A075B653 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav16A0A075B653 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16A0A075B653 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.89□□□□□ -0.03
Trav16A0A075B653 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16A0A075B653 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16A0A075B653 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16A0A075B653 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16A0A075B653 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16A0A075B653 Mir6538-201ENSMUST00000183713 110 ntBASIC14.89□□□□□ -0.03
Trav16A0A075B653 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav16A0A075B653 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav16A0A075B653 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16A0A075B653 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16A0A075B653 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16A0A075B653 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16A0A075B653 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16A0A075B653 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16A0A075B653 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav16A0A075B653 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav16A0A075B653 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav16A0A075B653 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav16A0A075B653 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav16A0A075B653 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms