Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav4-2A0A075B638 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-2A0A075B638 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-2A0A075B638 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Trav4-2A0A075B638 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-2A0A075B638 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-2A0A075B638 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-2A0A075B638 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4-2A0A075B638 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav4-2A0A075B638 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav4-2A0A075B638 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav4-2A0A075B638 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav4-2A0A075B638 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4-2A0A075B638 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4-2A0A075B638 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC15.33■□□□□ 0.04
Trav4-2A0A075B638 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4-2A0A075B638 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav4-2A0A075B638 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.33■□□□□ 0.04
Trav4-2A0A075B638 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.33■□□□□ 0.04
Trav4-2A0A075B638 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.33■□□□□ 0.04
Trav4-2A0A075B638 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4-2A0A075B638 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4-2A0A075B638 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav4-2A0A075B638 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4-2A0A075B638 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4-2A0A075B638 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4-2A0A075B638 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.33■□□□□ 0.04
Trav4-2A0A075B638 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4-2A0A075B638 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4-2A0A075B638 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.33■□□□□ 0.04
Trav4-2A0A075B638 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav4-2A0A075B638 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-2A0A075B638 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-2A0A075B638 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-2A0A075B638 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-2A0A075B638 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.32■□□□□ 0.04
Trav4-2A0A075B638 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-2A0A075B638 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav4-2A0A075B638 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav4-2A0A075B638 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.32■□□□□ 0.04
Trav4-2A0A075B638 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav4-2A0A075B638 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4-2A0A075B638 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-2A0A075B638 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-2A0A075B638 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-2A0A075B638 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-2A0A075B638 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.31■□□□□ 0.04
Trav4-2A0A075B638 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav4-2A0A075B638 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-2A0A075B638 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-2A0A075B638 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav4-2A0A075B638 AA386476-201ENSMUST00000098781 1665 ntBASIC15.31■□□□□ 0.04
Trav4-2A0A075B638 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.31■□□□□ 0.04
Trav4-2A0A075B638 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-2A0A075B638 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-2A0A075B638 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.31■□□□□ 0.04
Trav4-2A0A075B638 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4-2A0A075B638 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav4-2A0A075B638 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-2A0A075B638 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-2A0A075B638 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-2A0A075B638 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav4-2A0A075B638 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Trav4-2A0A075B638 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-2A0A075B638 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-2A0A075B638 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-2A0A075B638 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
Trav4-2A0A075B638 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav4-2A0A075B638 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.3■□□□□ 0.04
Trav4-2A0A075B638 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav4-2A0A075B638 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-2A0A075B638 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-2A0A075B638 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-2A0A075B638 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4-2A0A075B638 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-2A0A075B638 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
Trav4-2A0A075B638 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-2A0A075B638 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-2A0A075B638 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav4-2A0A075B638 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-2A0A075B638 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-2A0A075B638 Rarb-207ENSMUST00000225921 2756 ntBASIC15.29■□□□□ 0.04
Trav4-2A0A075B638 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-2A0A075B638 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-2A0A075B638 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-2A0A075B638 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav4-2A0A075B638 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-2A0A075B638 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4-2A0A075B638 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav4-2A0A075B638 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 105.8 ms