Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Upk1bQ9Z2C6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Upk1bQ9Z2C6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Upk1bQ9Z2C6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Upk1bQ9Z2C6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Upk1bQ9Z2C6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.03■□□□□ 0.48
Upk1bQ9Z2C6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Upk1bQ9Z2C6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Upk1bQ9Z2C6 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Upk1bQ9Z2C6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Upk1bQ9Z2C6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Upk1bQ9Z2C6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Upk1bQ9Z2C6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Upk1bQ9Z2C6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.02■□□□□ 0.48
Upk1bQ9Z2C6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.02■□□□□ 0.48
Upk1bQ9Z2C6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.02■□□□□ 0.48
Upk1bQ9Z2C6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Upk1bQ9Z2C6 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Upk1bQ9Z2C6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Upk1bQ9Z2C6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Upk1bQ9Z2C6 Gm43530-201ENSMUST00000195920 274 ntBASIC18.01■□□□□ 0.47
Upk1bQ9Z2C6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Upk1bQ9Z2C6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Upk1bQ9Z2C6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Upk1bQ9Z2C6 Dapk1-207ENSMUST00000226059 5009 ntBASIC18■□□□□ 0.47
Upk1bQ9Z2C6 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Upk1bQ9Z2C6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18■□□□□ 0.47
Upk1bQ9Z2C6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Upk1bQ9Z2C6 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Upk1bQ9Z2C6 Gm10232-201ENSMUST00000089221 720 ntBASIC18■□□□□ 0.47
Upk1bQ9Z2C6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Upk1bQ9Z2C6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
Upk1bQ9Z2C6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk1bQ9Z2C6 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Upk1bQ9Z2C6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk1bQ9Z2C6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk1bQ9Z2C6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk1bQ9Z2C6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk1bQ9Z2C6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.99■□□□□ 0.47
Upk1bQ9Z2C6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Upk1bQ9Z2C6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk1bQ9Z2C6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk1bQ9Z2C6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk1bQ9Z2C6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk1bQ9Z2C6 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk1bQ9Z2C6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Upk1bQ9Z2C6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Upk1bQ9Z2C6 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Upk1bQ9Z2C6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Upk1bQ9Z2C6 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Upk1bQ9Z2C6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Upk1bQ9Z2C6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Upk1bQ9Z2C6 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Upk1bQ9Z2C6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.97■□□□□ 0.47
Upk1bQ9Z2C6 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Upk1bQ9Z2C6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.97■□□□□ 0.47
Upk1bQ9Z2C6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Upk1bQ9Z2C6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Upk1bQ9Z2C6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Upk1bQ9Z2C6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1bQ9Z2C6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Upk1bQ9Z2C6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1bQ9Z2C6 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.96■□□□□ 0.47
Upk1bQ9Z2C6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1bQ9Z2C6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1bQ9Z2C6 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.96■□□□□ 0.47
Upk1bQ9Z2C6 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.96■□□□□ 0.47
Upk1bQ9Z2C6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1bQ9Z2C6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1bQ9Z2C6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.96■□□□□ 0.47
Upk1bQ9Z2C6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1bQ9Z2C6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1bQ9Z2C6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Upk1bQ9Z2C6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Upk1bQ9Z2C6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.96■□□□□ 0.46
Upk1bQ9Z2C6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
Upk1bQ9Z2C6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 BC021767-201ENSMUST00000126387 1716 ntBASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Upk1bQ9Z2C6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Upk1bQ9Z2C6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms