Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.86■□□□□ 0.45
ClcnkaQ9WUB7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
ClcnkaQ9WUB7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.86■□□□□ 0.45
ClcnkaQ9WUB7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ClcnkaQ9WUB7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ClcnkaQ9WUB7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.86■□□□□ 0.45
ClcnkaQ9WUB7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ClcnkaQ9WUB7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
ClcnkaQ9WUB7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
ClcnkaQ9WUB7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ClcnkaQ9WUB7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
ClcnkaQ9WUB7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
ClcnkaQ9WUB7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ClcnkaQ9WUB7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
ClcnkaQ9WUB7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ClcnkaQ9WUB7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ClcnkaQ9WUB7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ClcnkaQ9WUB7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ClcnkaQ9WUB7 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ClcnkaQ9WUB7 Gm27454-201ENSMUST00000185090 204 ntBASIC17.84■□□□□ 0.45
ClcnkaQ9WUB7 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ClcnkaQ9WUB7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ClcnkaQ9WUB7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.83■□□□□ 0.45
ClcnkaQ9WUB7 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ClcnkaQ9WUB7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ClcnkaQ9WUB7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
ClcnkaQ9WUB7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.83■□□□□ 0.44
ClcnkaQ9WUB7 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ClcnkaQ9WUB7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ClcnkaQ9WUB7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ClcnkaQ9WUB7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ClcnkaQ9WUB7 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ClcnkaQ9WUB7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.82■□□□□ 0.44
ClcnkaQ9WUB7 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClcnkaQ9WUB7 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
ClcnkaQ9WUB7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClcnkaQ9WUB7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClcnkaQ9WUB7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClcnkaQ9WUB7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClcnkaQ9WUB7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
ClcnkaQ9WUB7 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.82■□□□□ 0.44
ClcnkaQ9WUB7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClcnkaQ9WUB7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
ClcnkaQ9WUB7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ClcnkaQ9WUB7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.82■□□□□ 0.44
ClcnkaQ9WUB7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ClcnkaQ9WUB7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClcnkaQ9WUB7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ClcnkaQ9WUB7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.81■□□□□ 0.44
ClcnkaQ9WUB7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClcnkaQ9WUB7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClcnkaQ9WUB7 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.81■□□□□ 0.44
ClcnkaQ9WUB7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClcnkaQ9WUB7 Spcs1-204ENSMUST00000226782 949 ntBASIC17.81■□□□□ 0.44
ClcnkaQ9WUB7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClcnkaQ9WUB7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClcnkaQ9WUB7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ClcnkaQ9WUB7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ClcnkaQ9WUB7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ClcnkaQ9WUB7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClcnkaQ9WUB7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
ClcnkaQ9WUB7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ClcnkaQ9WUB7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClcnkaQ9WUB7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClcnkaQ9WUB7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClcnkaQ9WUB7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClcnkaQ9WUB7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClcnkaQ9WUB7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClcnkaQ9WUB7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ClcnkaQ9WUB7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClcnkaQ9WUB7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClcnkaQ9WUB7 Mir7075-201ENSMUST00000184187 82 ntBASIC17.8■□□□□ 0.44
ClcnkaQ9WUB7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClcnkaQ9WUB7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClcnkaQ9WUB7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClcnkaQ9WUB7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
ClcnkaQ9WUB7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
ClcnkaQ9WUB7 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.8■□□□□ 0.44
ClcnkaQ9WUB7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClcnkaQ9WUB7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ClcnkaQ9WUB7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ClcnkaQ9WUB7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.79■□□□□ 0.44
ClcnkaQ9WUB7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClcnkaQ9WUB7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClcnkaQ9WUB7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.79■□□□□ 0.44
ClcnkaQ9WUB7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClcnkaQ9WUB7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClcnkaQ9WUB7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.79■□□□□ 0.44
ClcnkaQ9WUB7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClcnkaQ9WUB7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ClcnkaQ9WUB7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClcnkaQ9WUB7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClcnkaQ9WUB7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClcnkaQ9WUB7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClcnkaQ9WUB7 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClcnkaQ9WUB7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClcnkaQ9WUB7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClcnkaQ9WUB7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ClcnkaQ9WUB7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ClcnkaQ9WUB7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms