Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tubd1Q9R1K7 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.89■□□□□ 0.78
Tubd1Q9R1K7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tubd1Q9R1K7 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tubd1Q9R1K7 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tubd1Q9R1K7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tubd1Q9R1K7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Tubd1Q9R1K7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tubd1Q9R1K7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Tubd1Q9R1K7 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tubd1Q9R1K7 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tubd1Q9R1K7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tubd1Q9R1K7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Tubd1Q9R1K7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Tubd1Q9R1K7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tubd1Q9R1K7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.88■□□□□ 0.77
Tubd1Q9R1K7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tubd1Q9R1K7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.88■□□□□ 0.77
Tubd1Q9R1K7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Tubd1Q9R1K7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.88■□□□□ 0.77
Tubd1Q9R1K7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tubd1Q9R1K7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tubd1Q9R1K7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tubd1Q9R1K7 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tubd1Q9R1K7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tubd1Q9R1K7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Tubd1Q9R1K7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tubd1Q9R1K7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tubd1Q9R1K7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
Tubd1Q9R1K7 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tubd1Q9R1K7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tubd1Q9R1K7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tubd1Q9R1K7 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tubd1Q9R1K7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tubd1Q9R1K7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
Tubd1Q9R1K7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tubd1Q9R1K7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tubd1Q9R1K7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tubd1Q9R1K7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.87■□□□□ 0.77
Tubd1Q9R1K7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tubd1Q9R1K7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
Tubd1Q9R1K7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Tubd1Q9R1K7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubd1Q9R1K7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Tubd1Q9R1K7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Tubd1Q9R1K7 Gm40848-201ENSMUST00000221998 324 ntBASIC19.86■□□□□ 0.77
Tubd1Q9R1K7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubd1Q9R1K7 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubd1Q9R1K7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubd1Q9R1K7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubd1Q9R1K7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubd1Q9R1K7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Tubd1Q9R1K7 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tubd1Q9R1K7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Tubd1Q9R1K7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
Tubd1Q9R1K7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubd1Q9R1K7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Tubd1Q9R1K7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Tubd1Q9R1K7 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.85■□□□□ 0.77
Tubd1Q9R1K7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.85■□□□□ 0.77
Tubd1Q9R1K7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.85■□□□□ 0.77
Tubd1Q9R1K7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.85■□□□□ 0.77
Tubd1Q9R1K7 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.85■□□□□ 0.77
Tubd1Q9R1K7 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.85■□□□□ 0.77
Tubd1Q9R1K7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubd1Q9R1K7 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubd1Q9R1K7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Tubd1Q9R1K7 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Tubd1Q9R1K7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubd1Q9R1K7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubd1Q9R1K7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubd1Q9R1K7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Tubd1Q9R1K7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tubd1Q9R1K7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tubd1Q9R1K7 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Tubd1Q9R1K7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Tubd1Q9R1K7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tubd1Q9R1K7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tubd1Q9R1K7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tubd1Q9R1K7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tubd1Q9R1K7 Gm43060-201ENSMUST00000200621 289 ntBASIC19.84■□□□□ 0.77
Tubd1Q9R1K7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Tubd1Q9R1K7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.84■□□□□ 0.77
Tubd1Q9R1K7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tubd1Q9R1K7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Tubd1Q9R1K7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tubd1Q9R1K7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tubd1Q9R1K7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tubd1Q9R1K7 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Tubd1Q9R1K7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tubd1Q9R1K7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Tubd1Q9R1K7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tubd1Q9R1K7 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tubd1Q9R1K7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tubd1Q9R1K7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Tubd1Q9R1K7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tubd1Q9R1K7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Tubd1Q9R1K7 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Tubd1Q9R1K7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.81■□□□□ 0.76
Tubd1Q9R1K7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms