Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfwd2Q9R1A8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rfwd2Q9R1A8 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfwd2Q9R1A8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfwd2Q9R1A8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfwd2Q9R1A8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfwd2Q9R1A8 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfwd2Q9R1A8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfwd2Q9R1A8 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rfwd2Q9R1A8 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Rfwd2Q9R1A8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfwd2Q9R1A8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Rfwd2Q9R1A8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfwd2Q9R1A8 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Rfwd2Q9R1A8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfwd2Q9R1A8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfwd2Q9R1A8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rfwd2Q9R1A8 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Rfwd2Q9R1A8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfwd2Q9R1A8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.95■□□□□ 0.78
Rfwd2Q9R1A8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.95■□□□□ 0.78
Rfwd2Q9R1A8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Rfwd2Q9R1A8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfwd2Q9R1A8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfwd2Q9R1A8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rfwd2Q9R1A8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfwd2Q9R1A8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rfwd2Q9R1A8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Rfwd2Q9R1A8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.94■□□□□ 0.78
Rfwd2Q9R1A8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rfwd2Q9R1A8 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfwd2Q9R1A8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Rfwd2Q9R1A8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfwd2Q9R1A8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Rfwd2Q9R1A8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfwd2Q9R1A8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Rfwd2Q9R1A8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfwd2Q9R1A8 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfwd2Q9R1A8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfwd2Q9R1A8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfwd2Q9R1A8 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfwd2Q9R1A8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfwd2Q9R1A8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfwd2Q9R1A8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfwd2Q9R1A8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rfwd2Q9R1A8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfwd2Q9R1A8 Gm45102-201ENSMUST00000207427 857 ntBASIC19.92■□□□□ 0.78
Rfwd2Q9R1A8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfwd2Q9R1A8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfwd2Q9R1A8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfwd2Q9R1A8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfwd2Q9R1A8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfwd2Q9R1A8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfwd2Q9R1A8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rfwd2Q9R1A8 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfwd2Q9R1A8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rfwd2Q9R1A8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfwd2Q9R1A8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfwd2Q9R1A8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfwd2Q9R1A8 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfwd2Q9R1A8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rfwd2Q9R1A8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfwd2Q9R1A8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfwd2Q9R1A8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfwd2Q9R1A8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfwd2Q9R1A8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
Rfwd2Q9R1A8 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfwd2Q9R1A8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfwd2Q9R1A8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfwd2Q9R1A8 Gm14117-201ENSMUST00000122417 843 ntBASIC19.9■□□□□ 0.78
Rfwd2Q9R1A8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfwd2Q9R1A8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.9■□□□□ 0.78
Rfwd2Q9R1A8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.9■□□□□ 0.78
Rfwd2Q9R1A8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rfwd2Q9R1A8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfwd2Q9R1A8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfwd2Q9R1A8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rfwd2Q9R1A8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rfwd2Q9R1A8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.89■□□□□ 0.77
Rfwd2Q9R1A8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Rfwd2Q9R1A8 Rps24-207ENSMUST00000224568 714 ntBASIC19.89■□□□□ 0.77
Rfwd2Q9R1A8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.89■□□□□ 0.77
Rfwd2Q9R1A8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfwd2Q9R1A8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Rfwd2Q9R1A8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfwd2Q9R1A8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfwd2Q9R1A8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rfwd2Q9R1A8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfwd2Q9R1A8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfwd2Q9R1A8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfwd2Q9R1A8 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfwd2Q9R1A8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Rfwd2Q9R1A8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rfwd2Q9R1A8 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Rfwd2Q9R1A8 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfwd2Q9R1A8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rfwd2Q9R1A8 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rfwd2Q9R1A8 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Rfwd2Q9R1A8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.87■□□□□ 0.77
Rfwd2Q9R1A8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms