Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sec61a2Q9JLR1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Sec61a2Q9JLR1 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sec61a2Q9JLR1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sec61a2Q9JLR1 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sec61a2Q9JLR1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sec61a2Q9JLR1 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sec61a2Q9JLR1 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Sec61a2Q9JLR1 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sec61a2Q9JLR1 Gm27454-201ENSMUST00000185090 204 ntBASIC17.46■□□□□ 0.39
Sec61a2Q9JLR1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sec61a2Q9JLR1 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Sec61a2Q9JLR1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sec61a2Q9JLR1 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sec61a2Q9JLR1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sec61a2Q9JLR1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sec61a2Q9JLR1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Sec61a2Q9JLR1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
Sec61a2Q9JLR1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.45■□□□□ 0.38
Sec61a2Q9JLR1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Sec61a2Q9JLR1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Sec61a2Q9JLR1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sec61a2Q9JLR1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sec61a2Q9JLR1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Sec61a2Q9JLR1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sec61a2Q9JLR1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sec61a2Q9JLR1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sec61a2Q9JLR1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sec61a2Q9JLR1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sec61a2Q9JLR1 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sec61a2Q9JLR1 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sec61a2Q9JLR1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sec61a2Q9JLR1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.44■□□□□ 0.38
Sec61a2Q9JLR1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sec61a2Q9JLR1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sec61a2Q9JLR1 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sec61a2Q9JLR1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sec61a2Q9JLR1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sec61a2Q9JLR1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sec61a2Q9JLR1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.44■□□□□ 0.38
Sec61a2Q9JLR1 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Sec61a2Q9JLR1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sec61a2Q9JLR1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sec61a2Q9JLR1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sec61a2Q9JLR1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.44■□□□□ 0.38
Sec61a2Q9JLR1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sec61a2Q9JLR1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sec61a2Q9JLR1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sec61a2Q9JLR1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sec61a2Q9JLR1 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.43■□□□□ 0.38
Sec61a2Q9JLR1 Gm45417-201ENSMUST00000209533 758 ntBASIC17.43■□□□□ 0.38
Sec61a2Q9JLR1 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sec61a2Q9JLR1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Sec61a2Q9JLR1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sec61a2Q9JLR1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sec61a2Q9JLR1 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sec61a2Q9JLR1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sec61a2Q9JLR1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a2Q9JLR1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sec61a2Q9JLR1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sec61a2Q9JLR1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Sec61a2Q9JLR1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.42■□□□□ 0.38
Sec61a2Q9JLR1 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.42■□□□□ 0.38
Sec61a2Q9JLR1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a2Q9JLR1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a2Q9JLR1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a2Q9JLR1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a2Q9JLR1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a2Q9JLR1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sec61a2Q9JLR1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sec61a2Q9JLR1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Sec61a2Q9JLR1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sec61a2Q9JLR1 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.41■□□□□ 0.38
Sec61a2Q9JLR1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sec61a2Q9JLR1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Sec61a2Q9JLR1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sec61a2Q9JLR1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sec61a2Q9JLR1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.41■□□□□ 0.38
Sec61a2Q9JLR1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sec61a2Q9JLR1 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Sec61a2Q9JLR1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sec61a2Q9JLR1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sec61a2Q9JLR1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sec61a2Q9JLR1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
Sec61a2Q9JLR1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sec61a2Q9JLR1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sec61a2Q9JLR1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.4■□□□□ 0.38
Sec61a2Q9JLR1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Sec61a2Q9JLR1 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sec61a2Q9JLR1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.4■□□□□ 0.38
Sec61a2Q9JLR1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Sec61a2Q9JLR1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sec61a2Q9JLR1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sec61a2Q9JLR1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sec61a2Q9JLR1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sec61a2Q9JLR1 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.39■□□□□ 0.38
Sec61a2Q9JLR1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Sec61a2Q9JLR1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sec61a2Q9JLR1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sec61a2Q9JLR1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms