Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nup50Q9JIH2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Nup50Q9JIH2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup50Q9JIH2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.56■□□□□ 0.88
Nup50Q9JIH2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup50Q9JIH2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup50Q9JIH2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nup50Q9JIH2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup50Q9JIH2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nup50Q9JIH2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup50Q9JIH2 Serp2-204ENSMUST00000228055 705 ntBASIC20.56■□□□□ 0.88
Nup50Q9JIH2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Nup50Q9JIH2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup50Q9JIH2 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup50Q9JIH2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Nup50Q9JIH2 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nup50Q9JIH2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup50Q9JIH2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Nup50Q9JIH2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nup50Q9JIH2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup50Q9JIH2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Nup50Q9JIH2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.55■□□□□ 0.88
Nup50Q9JIH2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.55■□□□□ 0.88
Nup50Q9JIH2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup50Q9JIH2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup50Q9JIH2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Nup50Q9JIH2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Nup50Q9JIH2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup50Q9JIH2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup50Q9JIH2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup50Q9JIH2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Nup50Q9JIH2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup50Q9JIH2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nup50Q9JIH2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Nup50Q9JIH2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup50Q9JIH2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup50Q9JIH2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup50Q9JIH2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup50Q9JIH2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Nup50Q9JIH2 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nup50Q9JIH2 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.53■□□□□ 0.88
Nup50Q9JIH2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nup50Q9JIH2 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nup50Q9JIH2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nup50Q9JIH2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nup50Q9JIH2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Nup50Q9JIH2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nup50Q9JIH2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Nup50Q9JIH2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Nup50Q9JIH2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup50Q9JIH2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup50Q9JIH2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup50Q9JIH2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Nup50Q9JIH2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Nup50Q9JIH2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Nup50Q9JIH2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nup50Q9JIH2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup50Q9JIH2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup50Q9JIH2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup50Q9JIH2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Nup50Q9JIH2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.51■□□□□ 0.87
Nup50Q9JIH2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup50Q9JIH2 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.51■□□□□ 0.87
Nup50Q9JIH2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup50Q9JIH2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.51■□□□□ 0.87
Nup50Q9JIH2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nup50Q9JIH2 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.5■□□□□ 0.87
Nup50Q9JIH2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nup50Q9JIH2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nup50Q9JIH2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Nup50Q9JIH2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.5■□□□□ 0.87
Nup50Q9JIH2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nup50Q9JIH2 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup50Q9JIH2 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.49■□□□□ 0.87
Nup50Q9JIH2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup50Q9JIH2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.49■□□□□ 0.87
Nup50Q9JIH2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup50Q9JIH2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nup50Q9JIH2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.49■□□□□ 0.87
Nup50Q9JIH2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup50Q9JIH2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nup50Q9JIH2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup50Q9JIH2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nup50Q9JIH2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Nup50Q9JIH2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nup50Q9JIH2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.48■□□□□ 0.87
Nup50Q9JIH2 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.48■□□□□ 0.87
Nup50Q9JIH2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nup50Q9JIH2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nup50Q9JIH2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Nup50Q9JIH2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Nup50Q9JIH2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Nup50Q9JIH2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nup50Q9JIH2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Nup50Q9JIH2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Nup50Q9JIH2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nup50Q9JIH2 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.48■□□□□ 0.87
Nup50Q9JIH2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.48■□□□□ 0.87
Nup50Q9JIH2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.48■□□□□ 0.87
Nup50Q9JIH2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms