Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtp4Q9ER80 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.22■□□□□ 0.51
Rtp4Q9ER80 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rtp4Q9ER80 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtp4Q9ER80 Gm5874-201ENSMUST00000096101 508 ntBASIC18.22■□□□□ 0.51
Rtp4Q9ER80 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtp4Q9ER80 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Rtp4Q9ER80 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtp4Q9ER80 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtp4Q9ER80 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rtp4Q9ER80 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rtp4Q9ER80 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtp4Q9ER80 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Rtp4Q9ER80 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtp4Q9ER80 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtp4Q9ER80 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtp4Q9ER80 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.2■□□□□ 0.5
Rtp4Q9ER80 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
Rtp4Q9ER80 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Rtp4Q9ER80 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtp4Q9ER80 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rtp4Q9ER80 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rtp4Q9ER80 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtp4Q9ER80 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtp4Q9ER80 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rtp4Q9ER80 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtp4Q9ER80 Gm40848-201ENSMUST00000221998 324 ntBASIC18.2■□□□□ 0.5
Rtp4Q9ER80 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtp4Q9ER80 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtp4Q9ER80 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtp4Q9ER80 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtp4Q9ER80 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtp4Q9ER80 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtp4Q9ER80 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Rtp4Q9ER80 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtp4Q9ER80 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.19■□□□□ 0.5
Rtp4Q9ER80 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtp4Q9ER80 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rtp4Q9ER80 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtp4Q9ER80 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtp4Q9ER80 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtp4Q9ER80 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Rtp4Q9ER80 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtp4Q9ER80 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtp4Q9ER80 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rtp4Q9ER80 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rtp4Q9ER80 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.18■□□□□ 0.5
Rtp4Q9ER80 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rtp4Q9ER80 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtp4Q9ER80 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.18■□□□□ 0.5
Rtp4Q9ER80 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rtp4Q9ER80 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.18■□□□□ 0.5
Rtp4Q9ER80 Gm43060-201ENSMUST00000200621 289 ntBASIC18.18■□□□□ 0.5
Rtp4Q9ER80 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtp4Q9ER80 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtp4Q9ER80 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtp4Q9ER80 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rtp4Q9ER80 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtp4Q9ER80 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.18■□□□□ 0.5
Rtp4Q9ER80 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtp4Q9ER80 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtp4Q9ER80 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtp4Q9ER80 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.17■□□□□ 0.5
Rtp4Q9ER80 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtp4Q9ER80 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.17■□□□□ 0.5
Rtp4Q9ER80 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rtp4Q9ER80 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Rtp4Q9ER80 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
Rtp4Q9ER80 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.17■□□□□ 0.5
Rtp4Q9ER80 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtp4Q9ER80 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rtp4Q9ER80 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtp4Q9ER80 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.17■□□□□ 0.5
Rtp4Q9ER80 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtp4Q9ER80 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtp4Q9ER80 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtp4Q9ER80 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtp4Q9ER80 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtp4Q9ER80 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.16■□□□□ 0.5
Rtp4Q9ER80 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.16■□□□□ 0.5
Rtp4Q9ER80 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtp4Q9ER80 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rtp4Q9ER80 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtp4Q9ER80 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtp4Q9ER80 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rtp4Q9ER80 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtp4Q9ER80 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtp4Q9ER80 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtp4Q9ER80 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rtp4Q9ER80 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtp4Q9ER80 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Rtp4Q9ER80 Smad6-203ENSMUST00000179458 273 ntBASIC18.15■□□□□ 0.5
Rtp4Q9ER80 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.15■□□□□ 0.5
Rtp4Q9ER80 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.15■□□□□ 0.5
Rtp4Q9ER80 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtp4Q9ER80 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Rtp4Q9ER80 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtp4Q9ER80 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rtp4Q9ER80 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.14■□□□□ 0.49
Rtp4Q9ER80 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms