Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.26■□□□□ 0.51
Hmgn3Q9DCB1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Hmgn3Q9DCB1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgn3Q9DCB1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgn3Q9DCB1 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.25■□□□□ 0.51
Hmgn3Q9DCB1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgn3Q9DCB1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgn3Q9DCB1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgn3Q9DCB1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.25■□□□□ 0.51
Hmgn3Q9DCB1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.25■□□□□ 0.51
Hmgn3Q9DCB1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgn3Q9DCB1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgn3Q9DCB1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgn3Q9DCB1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgn3Q9DCB1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Hmgn3Q9DCB1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.24■□□□□ 0.51
Hmgn3Q9DCB1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.24■□□□□ 0.51
Hmgn3Q9DCB1 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgn3Q9DCB1 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgn3Q9DCB1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgn3Q9DCB1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgn3Q9DCB1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgn3Q9DCB1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgn3Q9DCB1 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgn3Q9DCB1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgn3Q9DCB1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Hmgn3Q9DCB1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgn3Q9DCB1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgn3Q9DCB1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgn3Q9DCB1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn3Q9DCB1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn3Q9DCB1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn3Q9DCB1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Hmgn3Q9DCB1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn3Q9DCB1 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn3Q9DCB1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Hmgn3Q9DCB1 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn3Q9DCB1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn3Q9DCB1 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn3Q9DCB1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn3Q9DCB1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.23■□□□□ 0.51
Hmgn3Q9DCB1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.23■□□□□ 0.51
Hmgn3Q9DCB1 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn3Q9DCB1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn3Q9DCB1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgn3Q9DCB1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgn3Q9DCB1 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgn3Q9DCB1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.22■□□□□ 0.51
Hmgn3Q9DCB1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgn3Q9DCB1 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.22■□□□□ 0.51
Hmgn3Q9DCB1 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgn3Q9DCB1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Hmgn3Q9DCB1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.22■□□□□ 0.51
Hmgn3Q9DCB1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgn3Q9DCB1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgn3Q9DCB1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgn3Q9DCB1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgn3Q9DCB1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgn3Q9DCB1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgn3Q9DCB1 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.21■□□□□ 0.51
Hmgn3Q9DCB1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Hmgn3Q9DCB1 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgn3Q9DCB1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgn3Q9DCB1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.21■□□□□ 0.51
Hmgn3Q9DCB1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgn3Q9DCB1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgn3Q9DCB1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
Hmgn3Q9DCB1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Hmgn3Q9DCB1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn3Q9DCB1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.2■□□□□ 0.5
Hmgn3Q9DCB1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn3Q9DCB1 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.2■□□□□ 0.5
Hmgn3Q9DCB1 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn3Q9DCB1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Hmgn3Q9DCB1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn3Q9DCB1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn3Q9DCB1 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn3Q9DCB1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.2■□□□□ 0.5
Hmgn3Q9DCB1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn3Q9DCB1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.2■□□□□ 0.5
Hmgn3Q9DCB1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn3Q9DCB1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Hmgn3Q9DCB1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn3Q9DCB1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn3Q9DCB1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn3Q9DCB1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn3Q9DCB1 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn3Q9DCB1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn3Q9DCB1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Hmgn3Q9DCB1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn3Q9DCB1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Hmgn3Q9DCB1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn3Q9DCB1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.19■□□□□ 0.5
Hmgn3Q9DCB1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn3Q9DCB1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Hmgn3Q9DCB1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Hmgn3Q9DCB1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn3Q9DCB1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.19■□□□□ 0.5
Hmgn3Q9DCB1 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Hmgn3Q9DCB1 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms