Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Homer3Q99JP6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Homer3Q99JP6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.33■□□□□ 0.68
Homer3Q99JP6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.33■□□□□ 0.68
Homer3Q99JP6 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.33■□□□□ 0.68
Homer3Q99JP6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Homer3Q99JP6 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.33■□□□□ 0.68
Homer3Q99JP6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Homer3Q99JP6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Homer3Q99JP6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Homer3Q99JP6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Homer3Q99JP6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Homer3Q99JP6 AA386476-201ENSMUST00000098781 1665 ntBASIC19.33■□□□□ 0.68
Homer3Q99JP6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Homer3Q99JP6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Homer3Q99JP6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Homer3Q99JP6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Homer3Q99JP6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Homer3Q99JP6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Homer3Q99JP6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Homer3Q99JP6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Homer3Q99JP6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.32■□□□□ 0.68
Homer3Q99JP6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Homer3Q99JP6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Homer3Q99JP6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Homer3Q99JP6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Homer3Q99JP6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Homer3Q99JP6 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.32■□□□□ 0.68
Homer3Q99JP6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.32■□□□□ 0.68
Homer3Q99JP6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Homer3Q99JP6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Homer3Q99JP6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Homer3Q99JP6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Homer3Q99JP6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Homer3Q99JP6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.3■□□□□ 0.68
Homer3Q99JP6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Homer3Q99JP6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Homer3Q99JP6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Homer3Q99JP6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
Homer3Q99JP6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Homer3Q99JP6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Homer3Q99JP6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Homer3Q99JP6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Homer3Q99JP6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Homer3Q99JP6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Homer3Q99JP6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Homer3Q99JP6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Homer3Q99JP6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Homer3Q99JP6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Homer3Q99JP6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.29■□□□□ 0.68
Homer3Q99JP6 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.29■□□□□ 0.68
Homer3Q99JP6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Homer3Q99JP6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Homer3Q99JP6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Homer3Q99JP6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Homer3Q99JP6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Homer3Q99JP6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Homer3Q99JP6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Homer3Q99JP6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Homer3Q99JP6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.28■□□□□ 0.68
Homer3Q99JP6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.28■□□□□ 0.68
Homer3Q99JP6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Homer3Q99JP6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Homer3Q99JP6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Homer3Q99JP6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.28■□□□□ 0.68
Homer3Q99JP6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Homer3Q99JP6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Homer3Q99JP6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Homer3Q99JP6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Homer3Q99JP6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Homer3Q99JP6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.27■□□□□ 0.68
Homer3Q99JP6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.27■□□□□ 0.68
Homer3Q99JP6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.27■□□□□ 0.68
Homer3Q99JP6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.27■□□□□ 0.68
Homer3Q99JP6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Homer3Q99JP6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Homer3Q99JP6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Homer3Q99JP6 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.27■□□□□ 0.68
Homer3Q99JP6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Homer3Q99JP6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Homer3Q99JP6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Homer3Q99JP6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Homer3Q99JP6 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.26■□□□□ 0.67
Homer3Q99JP6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Homer3Q99JP6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Homer3Q99JP6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.26■□□□□ 0.67
Homer3Q99JP6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Homer3Q99JP6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Homer3Q99JP6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Homer3Q99JP6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.26■□□□□ 0.67
Homer3Q99JP6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Homer3Q99JP6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Homer3Q99JP6 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Homer3Q99JP6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Homer3Q99JP6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Homer3Q99JP6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Homer3Q99JP6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Homer3Q99JP6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Homer3Q99JP6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Homer3Q99JP6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms