Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb4Q91XZ6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb4Q91XZ6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.26■□□□□ 0.67
Pcdhb4Q91XZ6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb4Q91XZ6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Pcdhb4Q91XZ6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhb4Q91XZ6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pcdhb4Q91XZ6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb4Q91XZ6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb4Q91XZ6 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.26■□□□□ 0.67
Pcdhb4Q91XZ6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb4Q91XZ6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb4Q91XZ6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb4Q91XZ6 Rarb-207ENSMUST00000225921 2756 ntBASIC19.26■□□□□ 0.67
Pcdhb4Q91XZ6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhb4Q91XZ6 Golph3-205ENSMUST00000228671 2842 ntBASIC19.25■□□□□ 0.67
Pcdhb4Q91XZ6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb4Q91XZ6 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb4Q91XZ6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb4Q91XZ6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb4Q91XZ6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb4Q91XZ6 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhb4Q91XZ6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb4Q91XZ6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb4Q91XZ6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb4Q91XZ6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb4Q91XZ6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Pcdhb4Q91XZ6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb4Q91XZ6 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhb4Q91XZ6 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.25■□□□□ 0.67
Pcdhb4Q91XZ6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pcdhb4Q91XZ6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb4Q91XZ6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb4Q91XZ6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhb4Q91XZ6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb4Q91XZ6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb4Q91XZ6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb4Q91XZ6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb4Q91XZ6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.24■□□□□ 0.67
Pcdhb4Q91XZ6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhb4Q91XZ6 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb4Q91XZ6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb4Q91XZ6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb4Q91XZ6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhb4Q91XZ6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb4Q91XZ6 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb4Q91XZ6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb4Q91XZ6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.23■□□□□ 0.67
Pcdhb4Q91XZ6 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.23■□□□□ 0.67
Pcdhb4Q91XZ6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb4Q91XZ6 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb4Q91XZ6 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb4Q91XZ6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhb4Q91XZ6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
Pcdhb4Q91XZ6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb4Q91XZ6 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb4Q91XZ6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb4Q91XZ6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdhb4Q91XZ6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb4Q91XZ6 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb4Q91XZ6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb4Q91XZ6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb4Q91XZ6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb4Q91XZ6 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb4Q91XZ6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb4Q91XZ6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb4Q91XZ6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb4Q91XZ6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdhb4Q91XZ6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdhb4Q91XZ6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.21■□□□□ 0.67
Pcdhb4Q91XZ6 Golgb1-201ENSMUST00000023534 498 ntBASIC19.21■□□□□ 0.67
Pcdhb4Q91XZ6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb4Q91XZ6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb4Q91XZ6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb4Q91XZ6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb4Q91XZ6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb4Q91XZ6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb4Q91XZ6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Pcdhb4Q91XZ6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb4Q91XZ6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhb4Q91XZ6 Gm12922-201ENSMUST00000120626 809 ntBASIC19.2■□□□□ 0.66
Pcdhb4Q91XZ6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.2■□□□□ 0.66
Pcdhb4Q91XZ6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb4Q91XZ6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb4Q91XZ6 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.2■□□□□ 0.66
Pcdhb4Q91XZ6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb4Q91XZ6 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb4Q91XZ6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdhb4Q91XZ6 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.19■□□□□ 0.66
Pcdhb4Q91XZ6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb4Q91XZ6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb4Q91XZ6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb4Q91XZ6 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Pcdhb4Q91XZ6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb4Q91XZ6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb4Q91XZ6 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdhb4Q91XZ6 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb4Q91XZ6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdhb4Q91XZ6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb4Q91XZ6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms